Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_8649 |
Symbol | |
ID | 8340031 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 10035141 |
End bp | 10035698 |
Gene Length | 558 bp |
Protein Length | 185 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 644961731 |
Product | regulatory protein TetR |
Protein accession | YP_003119306 |
Protein GI | 256397742 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGAGCCG ACGCAGCACG CAATCTGGAA GCCGTCCTGA CCACCGGGGC GCGCATGCTC GCCGCCGATC CGGGCGCGAG CATCGCGGCC ATCGCGGCCG AGGCGGGGGT GGATCGACGC ACGGTCTACC GGCGGTTCGG CTCTCGCGAG GAGCTGCTGG CGGCGATCTA CGAGGCGCGC CTCACGGCGA TCGGCGAGGC CATCGAGGAC GCGCGGCTGC GGGAGGCACC GGTCGCCGTG GCGCTGCACC GCTACGTCGA GAACATCGTG GCGGTCAACC GGATATGGCC GGTCGACCTC AACCGGATGC TCGCCACCGA CGCGGTGCGC GAGCGGCGGA ACGCCTATGT CGCCGAGGTC GACGCGTTCC TCGAGCGCGC CACCGAGGAA GGACTGCTGC GCTCAGGGCT CCCGGCGGGG TGGGTCGGCG TACTCCTGCC GGAGGTGACG AACCTGGTGG TCCGGCAACA GCCGGAACTG AGCCACGGCC AGGCGGCGGA CCTGGTGGTC GAGACCCTGC TTCAGGGGAT CGGCGCCGCG CACGAGCGGG AGAGCTGA
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Protein sequence | MRADAARNLE AVLTTGARML AADPGASIAA IAAEAGVDRR TVYRRFGSRE ELLAAIYEAR LTAIGEAIED ARLREAPVAV ALHRYVENIV AVNRIWPVDL NRMLATDAVR ERRNAYVAEV DAFLERATEE GLLRSGLPAG WVGVLLPEVT NLVVRQQPEL SHGQAADLVV ETLLQGIGAA HERES
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