| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_8646 |
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| Symbol | |
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| ID | 8340028 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 10030443 |
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| End bp | 10032419 |
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| Gene Length | 1977 bp |
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| Protein Length | 658 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644961728 |
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| Product | NHL repeat containing protein |
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| Protein accession | YP_003119303 |
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| Protein GI | 256397739 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGCACT CCCCGGCGCC GGGCGTGCTC AAGCAGTGCG GCGTGGTCCG CACCGGCGAG
CTTCCCATCG CCGGCGCCGA GGTCACGTTG CTCCAAGCAG GCCGCGGAGC CGGTGCGACG
CCACGGGTAT TGGCGCACGT GCGTACCGGT AGCCATGGAG AATTCGGTCT CATCTACCGG
CGACCAGTCG ATCCCACGGC TGTGCTCTAT CTGACCGCTG ATGTCGGGCA GCCGAGCCGC
GAACGCAGCA GCGCTGGGCA TCCCGCCGCG CCGGTGGAGC TCGCTGCCGC ACTCGGTTCG
CCGAGCTCTG CGACTACTCC CAGCAGCGCC TCGCCGGTCG TGATCAACGA GCGCACGACC
GTCGCCGCCG GTTACGCCCT CGCGCAGTTC ATCGGCGACC GAGGCGTCTC CGGCACCTAC
CCGGGCCTGC AGAACGCAGC AGCCATCTCG CACAACCTCG CCGACGTCAC CACCGGCCAG
ATCGCCCCGC TGCTCGCGAG CCCGCCGAAC GGCGCGCTCA CCTCCACGCT GGCGACCTTC
AACACCCTGG CCGACCTCGT CGCCGGCTGC GTCGCCGGAC AGACCTGCCA GTCGCTGTTC
GCCCTGGCGC AGCCGCCGGG GAAAGCGCAG CCGACGAACA CGCTGCAAGC CGTCGCCGAC
ATCGCTCGGA CGCCGAGCAA CAACGTGCCG GGACTGTTCG CGCTCGCTGC CGTGAAGCAG
CCGTACACGC CGACGCTGAC CGCCGCGCCG GACGCCTGGA CCCTGGCCAT CCGCTACGAC
GGAAACGGCC ACGAGCTCGA CGGTCCCGGC AACCTCGCCT TCGACGCCGA CGGCAACGCG
TGGGTGACGA ACAACTACCC CTACAACCCG AATCCGTTCG CGTCGGTCTG CGGGGACACG
AAGGTCATCA AGCTCGCGCC GACCGGGCAG GACGCGCCCG GCGCGCCATA CCGCGGAGGC
GGTCTGTACG GCGCCGGGTT CGGGATCACG CTCGATCCGA AGGGCCACAC CTGGGTTGCC
AACTTCGGGT TCCAGGGCTC GCAGTGCCCT GTGAACGCCA GTCTCTTCTA TCGCAGCGTC
TCCGAATTCG GTCCGCGCGG TGCGGCGTTG TCCCCGCCTA CCGGATGGCG CAACGGGAAC
ATCGTCCAGC CGCAGGGAAT GGCGTCGGAC CGGCAGGGCA CCATCTGGAT CGCGAACTGC
GGCGGTTCCA ACGTCGTCGA ATACCCGCAC GGACGCCCGG AACTCGCGCG CACCATCACG
CCTCCGGCCT CCCTGCCCCT GGTGAAGCCC TTCGACATCG CCGTCGACCC GATGGGCCGC
AAATGGGTCA CCGACAACGG CACCAACAGT GTTCTGATGA TGTCGGCAGA CGGCGTCCCG
CAGCGTTCCA TCACGACCGG CGGTCTTCGC CGTCCGCTCG GCATCGCCTC GGACAGCCTC
GGCAACGTCT GGGTCGCCAA CCCCGGCATC CTCCCGGTTC CGTGTGGAGG CGACAGTGCG
ACCGACTTCG CGAACGCGGT GCAGAACGCG CCGTCCGGTG GCGGCGGTGT CGGTGGTGTC
GGGGGTACCG GCGGTTCGGT CACGATGATC GGTCCGGACG GTTCGACACC CGCGCAGCCG
TTCATGAACG GCGGCATCGT GCTGCCGTGG GGTGTCGCCG TCGACGGCGA CGACACGGTC
TGGGTGTCCA ACTTCGGTGG CCGGCGTCTT GTCCACCTCT GCGGCGCGCG CCTGTCGTCC
TGCCCTCCCG GCTACCGCGC CGGACAGCCG ATCTCGCCGG CCGCGACCGG CTACACGAGC
GACAGCCTGG CGCGGAACAC CGGCGTGCAG ATCGACCCGT CCGGCAACGT GTGGCTGGCG
AACAACTGGC TGACCGTGCC GGTGCAGACC AATCCGGGTG CGCACGAGGT GGTCGTGTTC
ATCGGGATGG CGGCGCCGGT GCGGACGCCG CTGCTCGGGG CTCCGCGGCG GCCGTGA
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| Protein sequence | MAHSPAPGVL KQCGVVRTGE LPIAGAEVTL LQAGRGAGAT PRVLAHVRTG SHGEFGLIYR
RPVDPTAVLY LTADVGQPSR ERSSAGHPAA PVELAAALGS PSSATTPSSA SPVVINERTT
VAAGYALAQF IGDRGVSGTY PGLQNAAAIS HNLADVTTGQ IAPLLASPPN GALTSTLATF
NTLADLVAGC VAGQTCQSLF ALAQPPGKAQ PTNTLQAVAD IARTPSNNVP GLFALAAVKQ
PYTPTLTAAP DAWTLAIRYD GNGHELDGPG NLAFDADGNA WVTNNYPYNP NPFASVCGDT
KVIKLAPTGQ DAPGAPYRGG GLYGAGFGIT LDPKGHTWVA NFGFQGSQCP VNASLFYRSV
SEFGPRGAAL SPPTGWRNGN IVQPQGMASD RQGTIWIANC GGSNVVEYPH GRPELARTIT
PPASLPLVKP FDIAVDPMGR KWVTDNGTNS VLMMSADGVP QRSITTGGLR RPLGIASDSL
GNVWVANPGI LPVPCGGDSA TDFANAVQNA PSGGGGVGGV GGTGGSVTMI GPDGSTPAQP
FMNGGIVLPW GVAVDGDDTV WVSNFGGRRL VHLCGARLSS CPPGYRAGQP ISPAATGYTS
DSLARNTGVQ IDPSGNVWLA NNWLTVPVQT NPGAHEVVVF IGMAAPVRTP LLGAPRRP
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