| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_8629 |
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| Symbol | |
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| ID | 8340011 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 10004871 |
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| End bp | 10005527 |
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| Gene Length | 657 bp |
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| Protein Length | 218 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644961711 |
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| Product | two component transcriptional regulator, winged helix family |
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| Protein accession | YP_003119286 |
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| Protein GI | 256397722 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0375098 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGAGGGTTC TGATCGCTGA GGACGAGCCT GCGCTGGCGG CGTTGCTTGC GAAGGGGTTG
CGTCGGCGGG CGATGGCTGT GGATGTCGCG CTTGATGGTG GTGAGGCGCT GGAGCGGCTG
GCTGTTGATG ACTATGACGT GCTGGTGCTG GATCGCGATC TGCCTGAGGT GCATGGGGAC
GAGGTGTGTC GCCGGCTGGC TGCCGGCCGG GCGCGGGTCA GGATTCTGAT GCTGACGGCG
GCGGCTGCGC CGACTGAGCG GGTCGCGGGG CTCAACCTGG GCGCCGATGA CTACCTGCCC
AAGCCCTTCG ACTACGACGA GTTGGTGGCG CGGGTGCTGG CGCTGGGAAG ACGTGCGCAG
GCGCCGCTGC CGCCGGTGCT GGAGCGAGCG GGGATTCGGT TGGACAGTGG TCGGCGGCAG
GCTTTTCGGG ACGGGACCTA CTTACCGCTG TCGTTGAAGG AGTTCGGGAT TCTGGAGGCG
CTGCTCGCGG CCGACGGAAC GGTCGTCAGT AGCGAACGGC TCCTGGAAAG CGTGTGGGAC
GCGAACGCCG ACCCCTTCAC CAACACGGTC CGCGTCACGC TCAGCAAGCT CAGGAGCAAG
CTCGGGAAAC CGGACGTCGT CGAAACGGTG ATCGGCTCCG GGTACCGGAT CTCATGA
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| Protein sequence | MRVLIAEDEP ALAALLAKGL RRRAMAVDVA LDGGEALERL AVDDYDVLVL DRDLPEVHGD
EVCRRLAAGR ARVRILMLTA AAAPTERVAG LNLGADDYLP KPFDYDELVA RVLALGRRAQ
APLPPVLERA GIRLDSGRRQ AFRDGTYLPL SLKEFGILEA LLAADGTVVS SERLLESVWD
ANADPFTNTV RVTLSKLRSK LGKPDVVETV IGSGYRIS
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