| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_8599 |
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| Symbol | |
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| ID | 8339981 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 9968232 |
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| End bp | 9969527 |
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| Gene Length | 1296 bp |
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| Protein Length | 431 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644961684 |
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| Product | type II secretion system protein E |
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| Protein accession | YP_003119259 |
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| Protein GI | 256397695 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4962] Flp pilus assembly protein, ATPase CpaF |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.126695 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.494371 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACGCCAT CGCTGGGCTC GGTGGCCGAG GTGACCGCTG TGGTGGCCCG CAGACTTTCG
CTGACCGTGC GCGCGGAGCA GGACCGAACC GGTGGGGTCA TTCCGTCCGC TCGACGCCGC
GAACTGGCCG AAGAGCTGAT CGCAGCGGAA GTCCGGATCC GTCTTTCCGC AGTTGGACAG
AGGAGTGGGA CCGGACTTGC GGATGAGGCC GCGGCGCTGG AGAAGTCCGT CACTGACGCC
CTGTGCGCGA TGGGCGGTCT CCAGCCGTAC CTCGATATGC CGGATGTCGA GAACATCAAT
GCCACAGGCA GCGACCAGGT CTTTCTCCGT TTCTCTGACG GCCGGCGGGA GCGCGGAGCC
TTCCCCGTCG CAGACAGCGA TGCGGACCTG ATCGACCTGA TCCGCACGGC CGCCGCGCGC
GTCGGGCACG AGGAGCGACG GTTCGACCGG GGCGCCCCGA TGCTGTCGCT CCAGCTCCCC
GACGGTTCAC GACTGTTCGC GGTCATGGCG GTGACGAAGA GGCCCTGCAT CAGTGTCCGC
AGGCATCGCT ACCCGAAGGC GACCTTGTCG GATCTAGTCG CTCTCGGCAC TGTGGACGCA
GGTCTTGCGG CGTTCCTCTC GGCCGCTGTC CGCGCGAAGC TCAACATCCT TATTGCTGGT
GGGACCGGTG CGGGCAAGAC CACCATGCTT CGCGCACTCG CCTCTGAGAT GGACCCGACA
GAACGGCTCG TCACCATCGA GGATGCCCTC GAACTCGGCC TGGACACCGA CCCGGACCGA
CACTGGGACG TCGTCCCCAT GCAGGCCCGC GAGGCGAACT CCGAAGGCCG CGGGGTCATC
TCCCAAGCCG AACTCGTCCG TGCGGGCCTG CGGATGTCGC CGGACCGAGT CATCGTCGGC
GAGATTCGCG GTGCCGAGGT CATCCCTATG TGCAACGCGA TGTCGCAGGG CAACGACGGC
TCCATGGCCA CACTGCACGC CTCGACGTCG AGGGGCGTAT TCGCCAAGCT CGCGGCGTAC
GCGGCGCAAG CTCCGGAGCG GCTTGACCTG CCGTCGACCA ACTTGCTCGT AGCGAACGCT
CTACACCTGG TTGTTCAGCT GGATCAGGCT CCAGACGGTA CACGTGTTGT GTCGTCGGTT
CTGGAAATCA CCGGCGCCGA CGGCGCGATG GTGGTCGCGA ACGAGATCTT CCGGCCTGGT
CCCGATCGTC GCGCGGTTCC GGCCACTCCG CCTTCCCGGC TGGCGCAGCT GGAGCGCGCG
GGCTTCGACC CGGCGACGTT CCGGAGGCTC CGATGA
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| Protein sequence | MTPSLGSVAE VTAVVARRLS LTVRAEQDRT GGVIPSARRR ELAEELIAAE VRIRLSAVGQ
RSGTGLADEA AALEKSVTDA LCAMGGLQPY LDMPDVENIN ATGSDQVFLR FSDGRRERGA
FPVADSDADL IDLIRTAAAR VGHEERRFDR GAPMLSLQLP DGSRLFAVMA VTKRPCISVR
RHRYPKATLS DLVALGTVDA GLAAFLSAAV RAKLNILIAG GTGAGKTTML RALASEMDPT
ERLVTIEDAL ELGLDTDPDR HWDVVPMQAR EANSEGRGVI SQAELVRAGL RMSPDRVIVG
EIRGAEVIPM CNAMSQGNDG SMATLHASTS RGVFAKLAAY AAQAPERLDL PSTNLLVANA
LHLVVQLDQA PDGTRVVSSV LEITGADGAM VVANEIFRPG PDRRAVPATP PSRLAQLERA
GFDPATFRRL R
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