| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_8598 |
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| Symbol | |
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| ID | 8339980 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 9967360 |
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| End bp | 9968235 |
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| Gene Length | 876 bp |
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| Protein Length | 291 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644961683 |
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| Product | type II secretion system protein |
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| Protein accession | YP_003119258 |
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| Protein GI | 256397694 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4965] Flp pilus assembly protein TadB |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.12577 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.345078 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGTCG GAGCTATCGG AGTGCTCTGC GGTACTACGG TGGGTCTCGG CCTTGCTTGC
GGATTCGCGG CGTTTCGTAC CAAGCCCCCG ACACGACGGT TCAGACTCGG CCGACGGTTC
ACGCTGGTCG GGCTGAAGGG CCAGTCTCGG AAGCTGGCTG CATGTATCGG CGCCGGCGTC
GCCACTGGCC TGGTCACAGG CTGGCCTGTC GCGGCTTTGG CCGGTGGTCT CGCGGCGTGG
TGGCTTCCCG CCCTGCTCGG GCCCGATCGG TCGACGGCCA GAGAACTCGC CCGCACTGAA
GCGGTGGCGA CGTTCACGGA GATGCTGCGT GACACGTTGT CCGCAGCGTC AGGCATCGGC
CAGGCCGTTC GCTCGTCATG CGCTGCTGCC CCAGAGGCAA TTGCTGGAGA AGCCCGCGGG
CTGGCTCGCC GGATCGATGA TCAGCAAGAT CTCGCCGCAG CCCTGGTGAC CTTCGCTGAC
GAGCTCCGCG ACCCGACGGC GGACATCGTC GTGGTCTGTT TGGTCCACGC GATCAGGAAC
AGCGCGCAAG ATCTGGCCGG GCTGCTGGGC TCGCTTGCCG TTACAGCTCG CACGCTTGCT
GCGCAGCGTA AGCGCGCACA AGCCGCTCGA GTCCAGGTTC GTACCAGCGT CCGCATCGTT
ACGTGCGTGA CGGCTGGCAT GCTCGCCGGG CTGTTCGTGC TGGACCGATC CTTCCTGTCC
CCCTACGGCT CTGCGAGCGG GCAGTTCGTT CTTGCCTGTG GTCTCGCACT GTTCGCTGCG
GGCTACGTCT GGCTCTGGCG TATGGCCAAG CCACGAGCCA AGAAGCGCTT GCTGACGCGT
ATGGACCATG TACAGGAGAC CCCATCGTGG TGGTGA
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| Protein sequence | MNVGAIGVLC GTTVGLGLAC GFAAFRTKPP TRRFRLGRRF TLVGLKGQSR KLAACIGAGV
ATGLVTGWPV AALAGGLAAW WLPALLGPDR STARELARTE AVATFTEMLR DTLSAASGIG
QAVRSSCAAA PEAIAGEARG LARRIDDQQD LAAALVTFAD ELRDPTADIV VVCLVHAIRN
SAQDLAGLLG SLAVTARTLA AQRKRAQAAR VQVRTSVRIV TCVTAGMLAG LFVLDRSFLS
PYGSASGQFV LACGLALFAA GYVWLWRMAK PRAKKRLLTR MDHVQETPSW W
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