Gene Caci_8582 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_8582 
Symbol 
ID8339964 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp9954088 
End bp9954630 
Gene Length543 bp 
Protein Length180 aa 
Translation table11 
GC content64% 
IMG OID644961667 
ProductNLP/P60 protein 
Protein accessionYP_003119242 
Protein GI256397678 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0791] Cell wall-associated hydrolases (invasion-associated proteins) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0901428 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.349112 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCGTCG TCCTCACCAG TGCCGCCGCA GCCTCCGTCG CCTCGGCCGC CCTCAATCCA 
CTCACCGCCG TCTGGAACGC GACCACTTCC GCACCTCCAG CCGAGCGTGC ATTCAGCCCT
GATCAGCAGG TCGGCATCCT GGCCACCGCC GAGCAAAGCG CCCCGAACCC GGCCGCTGCC
GCCGCGATCG CCTTCACCTC CCGGCAGCTT GGCCTCCCGT ATGTCTGGGG CGGCAACGGA
CCGGTCAAAG GCGATGCCGG CTACGACTGT TCGGGATTGA CCATGGCGGC CTACGCAAGC
GCTGGAATCA GCATTCCCCG TACCGCCACA GACCAGTACC GACGCGGACC AGCCGTTCCC
CTTAGTTCAC TGAAGCCAGG AGATCTGGTT TTCTACGGAA ATAGCGGTTT CGCACACCAT
GTGGGAATCT TCGTCGGAGC CGGCGTCATT CTCGACGCGC CGAGAACAGG CACCGTGATT
CGACTCGACC CACTGGCAGC GGATGACCTC TTCGCCGCGA CTCGACCAAG CGCAGACCAC
TAG
 
Protein sequence
MFVVLTSAAA ASVASAALNP LTAVWNATTS APPAERAFSP DQQVGILATA EQSAPNPAAA 
AAIAFTSRQL GLPYVWGGNG PVKGDAGYDC SGLTMAAYAS AGISIPRTAT DQYRRGPAVP
LSSLKPGDLV FYGNSGFAHH VGIFVGAGVI LDAPRTGTVI RLDPLAADDL FAATRPSADH