Gene Caci_8567 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_8567 
Symbol 
ID8339948 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp9936767 
End bp9938155 
Gene Length1389 bp 
Protein Length462 aa 
Translation table11 
GC content71% 
IMG OID644961651 
ProductNAD(P)(+) transhydrogenase (AB-specific) 
Protein accessionYP_003119227 
Protein GI256397663 
COG category[C] Energy production and conversion 
COG ID[COG1282] NAD/NADP transhydrogenase beta subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.149953 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.040779 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCAGCG CCTGGAGAGA CACCGCGTAC CTGATCTCAG GGGTCTGTTT CATCCTCACC 
CTCAAGGGTC TGTCGGCGCC GCGCACGGCC CGCATGGGCA CGGTGATCGG GTCCTGCGGC
GCCGCGCTGG CGGTGCTCGT CTCCCTCACC ACGCCGCATC TGAAGCACCT GGGGCTGATC
ATCGGCGCCA TCGTGGTCGG CACCGCGATC GGCCTGCCGA CCGCGCGGAA GGTGCGGATG
ACCGCGATGC CGCAGCTGGT GGCGCTGTTC AACGGCGTCG GCGGCGGAGC GGCGGCACTG
GTGGCCGCGG TGGAGTTCCT GCGGCCCGGC AAGGGGATCG AGCACGCGGC GAGCGCGGAT
CTGGCGGCGA CCGCGTTCAC CATCCTGGTC GGCGGGGTCT CCTTCTCCGG ATCGATGATC
ACGTACGCCA AGCTGCAGGA GCTGATGACG ACCCGGCCGG TCGTGCTGCC GGCGGGGCGC
TGGGTGACCA TAGGGGTCGC GGCGGCGAGC GTGCTGTTCG GGATCCTCCT GGTGCCGTGG
CCGAGCACCG CGCTGATGGT GCTGCTGGCC CTGCTGGCGC TGGCCTTCGG CGTGCTGTTC
GTGCTGCCGG TGGGCGGCGC GGACGTGCCG ATCGTCATCT CGCTGCTGAA CGCCTTCACC
GGTCTGACGG TCGCGGCGAG CGGCTACGTG CTCAGCAACA CCCTGCTGGT GATCGCGGGC
ACGCTGGTCG GCGCGTCCGG AACGCTGCTG ACGCGGATGA TGGCCGCGGC GATGGGACGT
CCGCTGACCG GCACGCTGTT CGGGGCGTTC ACCGCCACGG CCGGCGGGGC GGCGGTGAGC
GGCGACGGGG CGGCGCGGCC GGTGCGGACG TCCTCGCCGG AGGACGTCGC GATCCTGCTC
GGGTACGCGC GCAAGGTGGT CATCGTCCCG GGCTACGGGC TCGCGGTGGC GCAGGCGCAG
CACACGGTGC GCGAGGTCGC GGACCTGCTG GCGTCGCGCG GGGTGCAGGT GTCGTACGGC
ATCCACCCGG TCGCCGGCCG GATGCCGGGG CATATGAACG TGCTGCTGGC CGAGGCGAAC
GTGCCGTATG AGTCGCTGCT GGAGCTGGAC GCGGCGAACT CGGAGCTGGC CTCGGCGGAC
GTGGCCGTGG TGATCGGCGC CAACGACGTG GTGAACCCGG CGGCACGGCA GCCGACCGGC
TCCCCGATCT CCGGCATGCC GATTCTGGAC GTCGACCTCG CTCAGCAGGT CGTGTTCTGC
AAGCGCTCGA TGCGGCCGGG GTTCGCCGGG GTCGAGAACG AGCTGCTGTA CGCGCAGAAC
ACGTCGCTGT TGTTCGGCGA CGCGAAGGAG AGCATGGCGA AGGTGCTGGC GGCGCTCAAG
ACACAGTGA
 
Protein sequence
MSSAWRDTAY LISGVCFILT LKGLSAPRTA RMGTVIGSCG AALAVLVSLT TPHLKHLGLI 
IGAIVVGTAI GLPTARKVRM TAMPQLVALF NGVGGGAAAL VAAVEFLRPG KGIEHAASAD
LAATAFTILV GGVSFSGSMI TYAKLQELMT TRPVVLPAGR WVTIGVAAAS VLFGILLVPW
PSTALMVLLA LLALAFGVLF VLPVGGADVP IVISLLNAFT GLTVAASGYV LSNTLLVIAG
TLVGASGTLL TRMMAAAMGR PLTGTLFGAF TATAGGAAVS GDGAARPVRT SSPEDVAILL
GYARKVVIVP GYGLAVAQAQ HTVREVADLL ASRGVQVSYG IHPVAGRMPG HMNVLLAEAN
VPYESLLELD AANSELASAD VAVVIGANDV VNPAARQPTG SPISGMPILD VDLAQQVVFC
KRSMRPGFAG VENELLYAQN TSLLFGDAKE SMAKVLAALK TQ