Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_8547 |
Symbol | |
ID | 8339927 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 9921401 |
End bp | 9921871 |
Gene Length | 471 bp |
Protein Length | 156 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 644961631 |
Product | NUDIX hydrolase |
Protein accession | YP_003119208 |
Protein GI | 256397644 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG1051] ADP-ribose pyrophosphatase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.00677981 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.000239658 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGACCCAGC CGAACCCAGC CGAGTCGTTC GCTAGTGCCC GCGCGGCCTC AGGCGTCCTC TTCTTCGACG CCGAGGGCCG CATCCTGTTA GTACGGCCGT CGTATAAGCC CGGTTGGGAC CTTCCGGGCG GATACGTCGA GTCCGGCGAG ACTCCCACGC AGGCCGCGAT GCGCGAGGTC CAGGAGGAGC TAGGCATCAA GCCGCCGATC GGCGCGCTGT TGGTCGCAGA CTGGGCACCG GCCGCAGACG AAGGCGACAA GCTCCTGTTC GTCTTCGACG GCGGCGAACT CGCCTCCGAG CATCGCGACC GCATCGAACT CGAAGCTGCC GAAATCGCCG GCTACGCCTT CCACGATCCC GAACTCATCG ACACTCTGCT GATCCCGCGC CTCGCACGCC GCGTCAAAGC CGCGCTCTTG GCGCGATCCC AGGACCGCAC TCTGTACCTC GAGCACGGCG AACCGAAGTA G
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Protein sequence | MTQPNPAESF ASARAASGVL FFDAEGRILL VRPSYKPGWD LPGGYVESGE TPTQAAMREV QEELGIKPPI GALLVADWAP AADEGDKLLF VFDGGELASE HRDRIELEAA EIAGYAFHDP ELIDTLLIPR LARRVKAALL ARSQDRTLYL EHGEPK
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