Gene Caci_8547 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_8547 
Symbol 
ID8339927 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp9921401 
End bp9921871 
Gene Length471 bp 
Protein Length156 aa 
Translation table11 
GC content66% 
IMG OID644961631 
ProductNUDIX hydrolase 
Protein accessionYP_003119208 
Protein GI256397644 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1051] ADP-ribose pyrophosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.00677981 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.000239658 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACCCAGC CGAACCCAGC CGAGTCGTTC GCTAGTGCCC GCGCGGCCTC AGGCGTCCTC 
TTCTTCGACG CCGAGGGCCG CATCCTGTTA GTACGGCCGT CGTATAAGCC CGGTTGGGAC
CTTCCGGGCG GATACGTCGA GTCCGGCGAG ACTCCCACGC AGGCCGCGAT GCGCGAGGTC
CAGGAGGAGC TAGGCATCAA GCCGCCGATC GGCGCGCTGT TGGTCGCAGA CTGGGCACCG
GCCGCAGACG AAGGCGACAA GCTCCTGTTC GTCTTCGACG GCGGCGAACT CGCCTCCGAG
CATCGCGACC GCATCGAACT CGAAGCTGCC GAAATCGCCG GCTACGCCTT CCACGATCCC
GAACTCATCG ACACTCTGCT GATCCCGCGC CTCGCACGCC GCGTCAAAGC CGCGCTCTTG
GCGCGATCCC AGGACCGCAC TCTGTACCTC GAGCACGGCG AACCGAAGTA G
 
Protein sequence
MTQPNPAESF ASARAASGVL FFDAEGRILL VRPSYKPGWD LPGGYVESGE TPTQAAMREV 
QEELGIKPPI GALLVADWAP AADEGDKLLF VFDGGELASE HRDRIELEAA EIAGYAFHDP
ELIDTLLIPR LARRVKAALL ARSQDRTLYL EHGEPK