Gene Caci_8534 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_8534 
Symbol 
ID8339914 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand+ 
Start bp9906735 
End bp9907355 
Gene Length621 bp 
Protein Length206 aa 
Translation table11 
GC content67% 
IMG OID644961621 
Producttranscriptional regulator, TetR family 
Protein accessionYP_003119198 
Protein GI256397634 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.027806 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.00115544 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGACCGACC AGGCGCACCA TCCCCGGCAA CGGCGCCACG GCGAAGAGCT GGAAGCCGCC 
CTCCTGGAAG CCGCGTGGCA GGAACTCGTG GAGACCGGCT TCACCAAACT GACCATGGAG 
TCGATCGCCA CCCGGGCGAA AACCGGTGTC GCCGTCCTCT ACCGCCGCTG GCCCAACAAG 
GACGACATGA TCCTGGCCGC GATCCGGCAC TACGGCACGA CCCATCCCGT CGCGGTCCCC 
GACACCGGCA ACCTCCGCGA CGACATGGTC GCCTTCCTCA CCGGCGTCAG CGTCTCCCGC 
GTCAGCTTCG CCGCCATCAT CAGCGCCACC TTCGCCGGCC TGCGGGACAG CACCGGCATG 
ACCCCCGCCG AACTCCGCGA ACGCGTGATG TCCAACGCCT CCCGCTGGTC AGAGCAGCTC 
CTCGCCCGCG CCCAGGACCG AGGCGAGATC GACCTGGACG CCATCCCTCC GGCGGTCCTG 
TCGATGCCGT TCGACCTCAT CCGGCACGAA ATGCTGATGA CCTACAAGCC GATCGCCCCG 
GAGCGCGTCA TCGAGATCGT CGACGACCTG TTCATGCCCC TCGTCACGAT CAACCGGAGG 
AAGAACGAGT GCGCGTCCTG A
 
Protein sequence
MTDQAHHPRQ RRHGEELEAA LLEAAWQELV ETGFTKLTME SIATRAKTGV AVLYRRWPNK 
DDMILAAIRH YGTTHPVAVP DTGNLRDDMV AFLTGVSVSR VSFAAIISAT FAGLRDSTGM 
TPAELRERVM SNASRWSEQL LARAQDRGEI DLDAIPPAVL SMPFDLIRHE MLMTYKPIAP 
ERVIEIVDDL FMPLVTINRR KNECAS