| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_8501 |
|---|
| Symbol | |
|---|
| ID | 8339881 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | - |
|---|
| Start bp | 9860484 |
|---|
| End bp | 9861560 |
|---|
| Gene Length | 1077 bp |
|---|
| Protein Length | 358 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 644961588 |
|---|
| Product | oxidoreductase domain protein |
|---|
| Protein accession | YP_003119165 |
|---|
| Protein GI | 256397601 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0673] Predicted dehydrogenases and related proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 0.17095 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCGGGGG GATCGCCGGC TGCCGAGCAG CCGGGAATCG CTGTGGTCGG TGCCGGTTAT
TGGGGACCGA ACCTCGTGCG GAACCTGATG GGCTCGCCGG ACTGGGACCT GCGCTGGCTG
GTCGATCTGG ACACCGAGCG GGCCCGGAAG GTCGCCGCGC CGTACGCCAG TGTCCAGGTC
ACCAGCGCGC TGGATGAGGC GCTGGCCGAC CCGCGGGTCA AGGCGGTTGC GATCGCGACG
CCGGCGCGCA CGCACCGGGA CGTCGCCATG GCCGCGCTGC GCGCGGGGCG GCACGTCCTG
GTCGAAAAGC CGCTGGCCGC CACGGAAGCC GAGGGCGCCG AACTGGTCGC CGAGGCTGCC
AAGCGCGGCC TGATCCTGAT GTGCGACCAC ACCTACTGCT ACACCCCGGC CGCCCTGGCG
ATCAGGGAGC TGATCCACTC CGGCGAGCTC GGCGAGGTCC ACTTCGTCGA CTCGGTCCGG
ATCAACCTGG GACTGATCCA GCCGGACGTG GACGTGTTGT GGGACCTCGC CCCGCACGAC
CTGTCGATCC TGGACTTCAT CCTCCCGGAC ACCGTGAAGC CGGTCGCGGT GGCCGCGACC
GGCGCCGACC CGCTCGGCGC CGGACGGACC TGCGTCGCCT ACCTGACGCT GGCGCTGTCC
TCCGGCGCCA TCGCGCACGG CCACGTGAAC TGGCTGTCCC CGACCAAGGT GCGCACCATC
ACCGTCGGCG GCTCCAAGCG CACGCTGGTC TGGGACGACG TGAACCCCGC GCAGCGGGTC
AGCGTCTTCG ACCGCGGCGT GGACCTGGCC CGGCCGGAGG AACTCGGCGC GGACCAGCGG
CGCGCGGCGC TGGTGTCCTA CCGGACCGGC GACATGGTCG CTCCGGCGCT GAACGAGCGC
GAGGCATTGG CGGCTGCGGT CGAGGAGTTC GCCCGCGCGG TACGCACCGG AACGCCGGCC
GCGACCGACG GCCGCGCCGG TCTCCGAGTC CTGCGAATCC TCGAGGCCGC CTCGCGCAGC
CTCGCCGAGA ACGGAGCCCT CGTGGCTGTG AACGACGACG CCTTGGAGGG CGAATGA
|
|---|
| Protein sequence | MSGGSPAAEQ PGIAVVGAGY WGPNLVRNLM GSPDWDLRWL VDLDTERARK VAAPYASVQV
TSALDEALAD PRVKAVAIAT PARTHRDVAM AALRAGRHVL VEKPLAATEA EGAELVAEAA
KRGLILMCDH TYCYTPAALA IRELIHSGEL GEVHFVDSVR INLGLIQPDV DVLWDLAPHD
LSILDFILPD TVKPVAVAAT GADPLGAGRT CVAYLTLALS SGAIAHGHVN WLSPTKVRTI
TVGGSKRTLV WDDVNPAQRV SVFDRGVDLA RPEELGADQR RAALVSYRTG DMVAPALNER
EALAAAVEEF ARAVRTGTPA ATDGRAGLRV LRILEAASRS LAENGALVAV NDDALEGE
|
|---|
| |