| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_8455 |
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| Symbol | |
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| ID | 8339835 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 9789935 |
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| End bp | 9790657 |
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| Gene Length | 723 bp |
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| Protein Length | 240 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 644961542 |
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| Product | two component transcriptional regulator, LuxR family |
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| Protein accession | YP_003119119 |
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| Protein GI | 256397555 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0699524 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.00000314192 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCTTGACG CCTCCACGAT CGGACTCGAG GACCGCCTCG AGGAGCGCCT CGACGTCGCC
GGCCTCGGGG AGGTCCGCAT CCTCGTCGTC GACGACCACC GCACCTTCGC CGAAGCGCTG
GCCTCCCGCC TGCGCGCCGA ACCCGGCTTC GGCGTGGCGG CGACCACGAC CATCGACGGC
GCGCGCCGCC TCATCGACGA GCGCCGCCCC GACGTGGTCC TGCTCGACGT CGACCTCGAC
GGCCGCGACG GCATCCGCTT CGCCGCCGAG ATCCGCGCCA GCCACGCCGA CGTCCGCATC
GTCATGGTCA CCGCCGGCGA GGAGGAGAAG CGCGTCGCCG AGGCGGTCCG CGGCGGCGTG
AACGCCTGGG TCGCCAAGGA CGGCTCGGTG GAGCACCTGC TCCAGGTGGT CCGCGGCGTC
CTGCGCGACG AGACCCACAT CCCGCCGCGC CTGCTCACCT ACGTCCTGAG CGACCTGATG
GCCGCCGAGC AGGAGCGCAA CGAGCACGAG ACCCTGGTCG GCGCCCTCAC CCCCCGCGAG
CGCGAAGTCC TGCAGTGCAT GGTCTCCGGC ATGACCCGCG CCTCCATCGC CCAGCACCTG
TTCCTGTCCC CCAACACGGT CCGCACCCAC ATGCAGAACG TTCTGGGCAA GCTCGGCGTA
CACTCCACGC TGGCCGCCGT CGCGGTGGCC CGACGCGCCG GAATCGGGGA AGACCCCCGC
TGA
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| Protein sequence | MLDASTIGLE DRLEERLDVA GLGEVRILVV DDHRTFAEAL ASRLRAEPGF GVAATTTIDG
ARRLIDERRP DVVLLDVDLD GRDGIRFAAE IRASHADVRI VMVTAGEEEK RVAEAVRGGV
NAWVAKDGSV EHLLQVVRGV LRDETHIPPR LLTYVLSDLM AAEQERNEHE TLVGALTPRE
REVLQCMVSG MTRASIAQHL FLSPNTVRTH MQNVLGKLGV HSTLAAVAVA RRAGIGEDPR
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