Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_8415 |
Symbol | |
ID | 8339795 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 9742517 |
End bp | 9743239 |
Gene Length | 723 bp |
Protein Length | 240 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 644961502 |
Product | zinc finger SWIM domain protein |
Protein accession | YP_003119079 |
Protein GI | 256397515 |
COG category | [S] Function unknown |
COG ID | [COG4715] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACAGCAT TCTTCAGCAA GAAGGATCTG GAGCGGCTGG CCGGGCCGCG CGCCTATCAG CGGGGGGTCG CCTCCGTCCC GGCCGTCGAC GGTCTCGGGA CCTCGGGAGC GGAGATCACC GCGACCGTTT ATGGTTCCGA GCCGTGGCAG GTGCGGTTGG ACCGGCGGCC GGCCGGACTG GACTTCTCCT GCGACTGCCC GCGCGGCATG GCCGGCGACT TCTGCCGGCA CTGTGTCGCG GTCGGGCTGG TGTACCTGGA CGGGCCGGTC GAGAAGACCC GGAGCGCGGA GTTCGCCGCC GCGCAGCGGG AGATCGCCGG ACTGCGGCGG CTCCTGGGCA TCCTGGACCG CGAGGATCTG ATCGCCCTGC TGCTGGACAC CGCCCACGAC GACCACGACC TGCGCCGCCA CCTCGCCGCC CGGGTCGACG AGCTGGTCAC CCCGGGCACC GACGTCAACG ACACCGAGCT GCGGCTGGCG GACGTGCGCG CCCTGACCGA CCCGGCGAGC GCCATCCCCG TCTACAAGAA GCACATCGAG GCGCGGATAG CGGCCCGCAA CCGCCGCGAC TACGCCGAAG CCGCGCGCTA TCTGCAGCAC CTGAAGGCGG CTTACCAGCG CCTGCACCGC AAGTCCGAAG CCGTGGCGTA CATCGAGGCC CTGCGCGCCG CCCACGCGCG CAAGCACAAC CTCCTGGAGG AACTGGCCAA GCGCGGCTTG TAG
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Protein sequence | MTAFFSKKDL ERLAGPRAYQ RGVASVPAVD GLGTSGAEIT ATVYGSEPWQ VRLDRRPAGL DFSCDCPRGM AGDFCRHCVA VGLVYLDGPV EKTRSAEFAA AQREIAGLRR LLGILDREDL IALLLDTAHD DHDLRRHLAA RVDELVTPGT DVNDTELRLA DVRALTDPAS AIPVYKKHIE ARIAARNRRD YAEAARYLQH LKAAYQRLHR KSEAVAYIEA LRAAHARKHN LLEELAKRGL
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