Gene Caci_8415 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_8415 
Symbol 
ID8339795 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp9742517 
End bp9743239 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content71% 
IMG OID644961502 
Productzinc finger SWIM domain protein 
Protein accessionYP_003119079 
Protein GI256397515 
COG category[S] Function unknown 
COG ID[COG4715] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAGCAT TCTTCAGCAA GAAGGATCTG GAGCGGCTGG CCGGGCCGCG CGCCTATCAG 
CGGGGGGTCG CCTCCGTCCC GGCCGTCGAC GGTCTCGGGA CCTCGGGAGC GGAGATCACC
GCGACCGTTT ATGGTTCCGA GCCGTGGCAG GTGCGGTTGG ACCGGCGGCC GGCCGGACTG
GACTTCTCCT GCGACTGCCC GCGCGGCATG GCCGGCGACT TCTGCCGGCA CTGTGTCGCG
GTCGGGCTGG TGTACCTGGA CGGGCCGGTC GAGAAGACCC GGAGCGCGGA GTTCGCCGCC
GCGCAGCGGG AGATCGCCGG ACTGCGGCGG CTCCTGGGCA TCCTGGACCG CGAGGATCTG
ATCGCCCTGC TGCTGGACAC CGCCCACGAC GACCACGACC TGCGCCGCCA CCTCGCCGCC
CGGGTCGACG AGCTGGTCAC CCCGGGCACC GACGTCAACG ACACCGAGCT GCGGCTGGCG
GACGTGCGCG CCCTGACCGA CCCGGCGAGC GCCATCCCCG TCTACAAGAA GCACATCGAG
GCGCGGATAG CGGCCCGCAA CCGCCGCGAC TACGCCGAAG CCGCGCGCTA TCTGCAGCAC
CTGAAGGCGG CTTACCAGCG CCTGCACCGC AAGTCCGAAG CCGTGGCGTA CATCGAGGCC
CTGCGCGCCG CCCACGCGCG CAAGCACAAC CTCCTGGAGG AACTGGCCAA GCGCGGCTTG
TAG
 
Protein sequence
MTAFFSKKDL ERLAGPRAYQ RGVASVPAVD GLGTSGAEIT ATVYGSEPWQ VRLDRRPAGL 
DFSCDCPRGM AGDFCRHCVA VGLVYLDGPV EKTRSAEFAA AQREIAGLRR LLGILDREDL
IALLLDTAHD DHDLRRHLAA RVDELVTPGT DVNDTELRLA DVRALTDPAS AIPVYKKHIE
ARIAARNRRD YAEAARYLQH LKAAYQRLHR KSEAVAYIEA LRAAHARKHN LLEELAKRGL