| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_8309 |
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| Symbol | |
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| ID | 8339688 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 9628796 |
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| End bp | 9630754 |
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| Gene Length | 1959 bp |
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| Protein Length | 652 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644961395 |
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| Product | inner-membrane translocator |
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| Protein accession | YP_003118973 |
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| Protein GI | 256397409 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0559] Branched-chain amino acid ABC-type transport system, permease components
[COG4177] ABC-type branched-chain amino acid transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.507178 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATGTCT TCCTCACGTA CACCGTCCTG GGCCTGGTCA TCGGCGCCTC GTACGCGATC
GCGGCGTCGG GCCTGGTCCT CACCTACGCC ACCACGCGGA TCTTCAACGT CGCGCACGGC
GCCACCGCCA TGGTCATGGC GTTCGTCTAC TGGGAGCTGG CCGACAACCA GGGTCTGTCC
ACCTGGCTCT CGGTCCTGAT CGTGGTCTTC GGGGTGGCGC CGCTGTTCGG GGCGCTGCTC
GAGCGCTGGG TCATCCGCCG GGTCGCCGAC GCCGGGGTCG GCGTCACGCT GGTCGTGACG
TGCGCGGTGC TGGTCGGGCT GATCGGCGCC GCGGAGAAGA TCTGGCCGCC CGGCGTGCAC
CAGGTGCAGC AGTTCTTCGC CGGGCACGGC GTCACCGTCG GCACGGTGCG GATCACCGGG
AACGAGCTGC TGACCGTCGC GCTGGCCGTG GTCGTCGGCG CCGTGCTCTG GGCGTTCCTG
ACGTTCACCC GGCTCGGCGT GGCGATGCGC GCGGCGGTCG ACGACAAGGA ACTGCTGGCG
CTGCACGGCG GACGGCCGAA CCTGATGTCC TCGATCGCCT GGGCCATGGG CTCGGCGTTG
GCGGCACTGG CTGGGATCCT GCTGGTCTCC TCCGAACCCA GCGAACTGAA CTACATATCC
CTGACGCTCC TGGTCGTGAA CTCCTACGCC GCCGCGATGG CCGGTCGGCT GACCAGCCTG
CCGCGGACGT TCGTCGGGGC GCTGGTGCTG GGACTACTGA ACGCCTACGC GTCGGGATAC
CTATGGACCG GCCCGGGATG GACCGGCTTC CGCGAGGCGA TTCCAGCCAT CTTCTTGTTG
CTCATGCTGT TGTTGATGCC GCAGGCGCAG TTGCGCGTCG GACGGCTGGC CGGCGTCGCG
GGGGTGCGGA CGCCGGAGAT GCGCCGCGTC GCAGTCGCCT CGGCGCTGGT GCTGCTCGCG
GTGGTCTTCG GCAACGCGGT GCTCAGCGAA GTGAACGTGA ACCGGATGGC GCTGGGACTG
TGCTTCGCGA TCCTGGCGCT GTCGCTGGTT CCGTTGACCG GGTTCAGCGG ATACGTGTCG
CTGGCGCAGT TCAGCTTCTT CGGCGTCGGC GCGCTGACCG TGGCGAAGAT GCATTCCTCG
GCGCCGACCG CGGTGCTCGC CGGGGCGGTG CTCGCGGCGG TGGCCGGGAT CCTGGTGGCG
TTGCCGTCGT TGCGATTGCA GGGCTTGTAC CTCGCGCTGT CGACGATCGC CTTCGCGCAG
ATCATGGACA CGATGGTGTT CCAGAACCCC TCACTCGGCG GGTTCGGCGG GTCGCTGACG
ACCAAGCGCC TGGACATGTT CGGATACCGC TTCACCTCCG ACAAGGCTTA CGCGCTCTTG
GCGGCGGCGG TTTTCTGCGT GCTCGGGGCA GCGGTGATCG TGTTGCGGAA GGGCCGCTAT
GGCAGGGTCC TGATCGCGTT GCGCGACTCC CCCGCCGCCT GCGCCACTTT GGGACTGAAT
CCGCGGACGG CGCGTGTCGC GGTGTTCGCG GGGTCGGCGG CTGTGGCCGG ACTCGGCGGC
GGGCTCTACG CGGGGTTGCA GAACCAGGTC GGGAGCACCA ACTTCCAGTT CTTCAACAGC
CTGCCGCTAT TGCTGATCGT GGTGTGCGCG GGCGTGACGT CGGTGAGCGG CGCGCTGCTC
GGCGGGATGC TGCTGATGGC GCTGAACAGC TATCCGAGCA CGCAGGCGTA CCTGTTCCTG
ATCCTGGCGG TCGCCGCGGT CGGACTCGGG AAGCAGCCGA ACGGGATCAC CGGATGGCTG
TTCTCCTTGC GGGACAACCC ATTGGGCGCG CGGCTCGGGC TCGGCTCGGC GGGGATCGCT
CGCGGCATCG CCACCCGCTC GGCAGCGAGT CAGAGTTCTG CGAGCGGCGG AGCGGTGACG
GTCGGGGCGA GCGGGGAGAA CGCGGAGGTC GAGGCGTGA
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| Protein sequence | MNVFLTYTVL GLVIGASYAI AASGLVLTYA TTRIFNVAHG ATAMVMAFVY WELADNQGLS
TWLSVLIVVF GVAPLFGALL ERWVIRRVAD AGVGVTLVVT CAVLVGLIGA AEKIWPPGVH
QVQQFFAGHG VTVGTVRITG NELLTVALAV VVGAVLWAFL TFTRLGVAMR AAVDDKELLA
LHGGRPNLMS SIAWAMGSAL AALAGILLVS SEPSELNYIS LTLLVVNSYA AAMAGRLTSL
PRTFVGALVL GLLNAYASGY LWTGPGWTGF REAIPAIFLL LMLLLMPQAQ LRVGRLAGVA
GVRTPEMRRV AVASALVLLA VVFGNAVLSE VNVNRMALGL CFAILALSLV PLTGFSGYVS
LAQFSFFGVG ALTVAKMHSS APTAVLAGAV LAAVAGILVA LPSLRLQGLY LALSTIAFAQ
IMDTMVFQNP SLGGFGGSLT TKRLDMFGYR FTSDKAYALL AAAVFCVLGA AVIVLRKGRY
GRVLIALRDS PAACATLGLN PRTARVAVFA GSAAVAGLGG GLYAGLQNQV GSTNFQFFNS
LPLLLIVVCA GVTSVSGALL GGMLLMALNS YPSTQAYLFL ILAVAAVGLG KQPNGITGWL
FSLRDNPLGA RLGLGSAGIA RGIATRSAAS QSSASGGAVT VGASGENAEV EA
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