Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_8265 |
Symbol | |
ID | 8339644 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 9576027 |
End bp | 9577019 |
Gene Length | 993 bp |
Protein Length | 330 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 644961351 |
Product | transcriptional regulator, ArsR family |
Protein accession | YP_003118929 |
Protein GI | 256397365 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.6759 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.106103 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGGCGGCGT CGTTGTCATT CACCGCGGAG GAGCTGGCTC AGGTCCGCTT CTCCGTCTCC CCGATGTGGG AAGTGCTCAC CAGTTTCCGA GTCCTGACCA GGCCTGGACT GTATCCGGTC CACGGGCCGT GGTTCGATCA GGTCCGTCCG CGGCTGGCCG CCGCCGGGCT GCTGACCGGA CATCTTTCCG CGCTATTCCA TGCCCCATCT TACGTTCCTG ACTTCCTCAC TCCGGCTCCG GCGAACTCGA CGCCGACGCT GGAGGAGGAG CTCGCTGCCA TTCAGGCGAC GTCCGAGGAC CACCTTTCGG CTGATCTCGA CATCTACGAC GAGAAGGTGC CGAACGGCGT GATACCGCCG TTCGCCGAGA GGCTGCGGAA CCATCGCGAG CAAGCACTCG GCGAGCTGTC CAAGGACATC GAGCACTACT TCCAGATAGC GCTCGCGCCC TACTGGTCGC GTATCAAAAC CCTGCTCGAG TCGGACATCT ACTACCGCGC GCGGCAGGTC GCCGAGTACG GCGCGGCGCG GTTGTTCAAC GACCTGCACC CGGACGTCAG CTGGAACAGC GGGACGCTGC GGATGCTGCA CCGGCAGCGC GTGCTCTGCC GCGACGACAA CGCTCCGGGT CTGATCCTGG TGCCCTCGGC CTTCGCCTGG AACAAGATCT ACACCCGGGC CGCGACCGGC GACGTGCCGC AGCTCTGCTT CGGGGCGCGG GGGGTCGGGA CGCTTTTCGA GCGCCGGGCG GCCGGTCCGT CGGACGCCGT GGCCGCCGTC ATCGGACGGT CGCGGGCCCT TCTGCTGGCT GAACTTGAGG CTCCGGCATC CACCAGCGAC CTCGCCACGC GGACTGGAAT GTCGGCCGGC GGGGTATCGG AACACCTGAC CGCGTTGCGG GGAGCGGGCA TGGTTTCCGC ACATCGTGCG GGACGTTCGG TGCTCTACGC GCGCACCTCC GTGGCGGACT CGTTGTTGGC GGCAGCGGTT TGA
|
Protein sequence | MAASLSFTAE ELAQVRFSVS PMWEVLTSFR VLTRPGLYPV HGPWFDQVRP RLAAAGLLTG HLSALFHAPS YVPDFLTPAP ANSTPTLEEE LAAIQATSED HLSADLDIYD EKVPNGVIPP FAERLRNHRE QALGELSKDI EHYFQIALAP YWSRIKTLLE SDIYYRARQV AEYGAARLFN DLHPDVSWNS GTLRMLHRQR VLCRDDNAPG LILVPSAFAW NKIYTRAATG DVPQLCFGAR GVGTLFERRA AGPSDAVAAV IGRSRALLLA ELEAPASTSD LATRTGMSAG GVSEHLTALR GAGMVSAHRA GRSVLYARTS VADSLLAAAV
|
| |