Gene Caci_8260 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_8260 
Symbol 
ID8339639 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp9569084 
End bp9569995 
Gene Length912 bp 
Protein Length303 aa 
Translation table11 
GC content76% 
IMG OID644961346 
ProductNUDIX hydrolase 
Protein accessionYP_003118924 
Protein GI256397360 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1051] ADP-ribose pyrophosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGCCG CCGACGACGC CGCCGACCAG CCCGCACCGA TCCGGGTCCG GGCCGCCGGC 
TGCGTCGTGT GGCGCCCCGG TCCCGCCGGG CCGGAGGTGG CGCTGATCCA CCGTCCCCGC
TACGACGACT GGTCCTTCCC CAAGGGCAAG CTCGACGAGG GCGAGGGCTA CGTCCAGGCG
GCGATCCGCG AAGTGCGCGA GGAGACCGGG TATCCGGTGG TCCTCGGGAG GCGGCTGCCG
ACGCAGGTCT ACGACGTGTC CTTCGGCGGA CCGGCGCGGA CGAAGCGCGT GAAGTACTGG
GCCGCGCAAG CCGCCGTGGA CGCCGACTTC CAGCCGAACT CCGAAGTCGA CCGGCTGGAG
TGGCTGCCCC TGGACGGCGC GACAGCGCGG CTGACCCGGC AGACCGACCG CGACCTGTTA
CAGGCCTTCG CCGCGGCGCC GGTCGACACC GTGCCGGTGC TCCTGCTGCG GCACGCCGAG
GCGATCCCGC GCAAGCGCTG GGACGGCCCG GAGCTGGAGC GTCCGCTGAC CGGCCGCGGC
CGGAACGACG CCGAGGCGCT GGTCCCGGTG CTGGCCGCGT ACGGCGAGGC GACACTGGTC
GCCTCGCCCT TCGCCCGCTG TGTCGCGACG CTCACGCCGA CCGCCCGCGC CGCCGGTGCC
GAGCTGACTC TGGAGCCCGC CCTCGGCGAG GGCTCGGACC CCGACGCCGG GCGCGGCTGG
CTGCGCGGCG TGCTGAAGGC CGGGCGCACG ACCGTGGCGT GTACCCACCG GCCGGTTCTG
CCCGAGCTCC TCGCCGAAAG CCCTCTCGCG CAGGCGATGC ACTCCGGCCG CCGGGCTCTC
GCGCCGGCCG AGGCGTGGGT GCTGCACGCC CGCGACGGCC ACGTCGTGGC GGTCGACCGC
TTGCAGCTGT GA
 
Protein sequence
MNAADDAADQ PAPIRVRAAG CVVWRPGPAG PEVALIHRPR YDDWSFPKGK LDEGEGYVQA 
AIREVREETG YPVVLGRRLP TQVYDVSFGG PARTKRVKYW AAQAAVDADF QPNSEVDRLE
WLPLDGATAR LTRQTDRDLL QAFAAAPVDT VPVLLLRHAE AIPRKRWDGP ELERPLTGRG
RNDAEALVPV LAAYGEATLV ASPFARCVAT LTPTARAAGA ELTLEPALGE GSDPDAGRGW
LRGVLKAGRT TVACTHRPVL PELLAESPLA QAMHSGRRAL APAEAWVLHA RDGHVVAVDR
LQL