| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_8234 |
|---|
| Symbol | |
|---|
| ID | 8339613 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | - |
|---|
| Start bp | 9546535 |
|---|
| End bp | 9546906 |
|---|
| Gene Length | 372 bp |
|---|
| Protein Length | 123 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 644961320 |
|---|
| Product | transcriptional regulator, PadR-like family |
|---|
| Protein accession | YP_003118898 |
|---|
| Protein GI | 256397334 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1695] Predicted transcriptional regulators |
|---|
| TIGRFAM ID | [TIGR03433] transcriptional regulator, Acidobacterial, PadR-family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 44 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCAGG ACATGATGCG CGGACACCTC GACGGTCTGG TGCTGGCGGT GCTCGCCACC
GGACCCTCGC ACGGATACGG ACTCATCGAG GCATTGCGGG ACCGCAGCGG CGGAGTCTTC
GACCTCCCCG AGGGCTCGGT CTACCCGGCA CTGCACCGCC TGGAGCGCGC CGGCCTGGTC
GCCAGCGGCT GGTCCGAGGT CGCCGGCCGC CGCCGCCGGG TCTACAGCCT GACCGCCTCA
GGCAGCCGCG CCGCCGAGGA TCGCCGCACC GAGTGGCGCT CGTTCTCGGC CGCGGTGGAG
CGCGTGTTCG GCGCCGAGAC CAAAGCCGGT GGCGGCGGCC GGACCGACGC GGGTTCGGCG
GTGGCGTCAT GA
|
|---|
| Protein sequence | MSQDMMRGHL DGLVLAVLAT GPSHGYGLIE ALRDRSGGVF DLPEGSVYPA LHRLERAGLV
ASGWSEVAGR RRRVYSLTAS GSRAAEDRRT EWRSFSAAVE RVFGAETKAG GGGRTDAGSA
VAS
|
|---|
| |