| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_8205 |
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| Symbol | |
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| ID | 8339584 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 9516906 |
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| End bp | 9517820 |
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| Gene Length | 915 bp |
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| Protein Length | 304 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 644961291 |
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| Product | type II secretion system protein |
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| Protein accession | YP_003118869 |
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| Protein GI | 256397305 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4965] Flp pilus assembly protein TadB |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.914565 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 44 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGTACG AAGTACTGGC CGGCGCGCTG GTCGGGCTCG GGCTGTTCCT GCTCATCAGG
GCCCTGATCC CCGGCCGGCC GGACCCGATG GCCGCGATCG CCCGCATCGA CGCGCTGCGC
CAGCACACCT CGCTGGGTCC GCAGCAGGAC CAGGCTCCGC CCAAGGGTCT GGCCAAGCTG
CGCGAGGACC TCGGCGCGTC GATGAACGAC TTCTACATCC GCCAGGGCTG GCAGATCCGC
TCGCTGCGCG CGGACCTGGC GATCCTGGAC CGCTCGGTGG AGCAGTTCCT GGCCGCGAAG
CTGCTGCTGG CCGCTCTGGG CATCATCTTC GGGCCGTTCG TCTTCGCGGC GGTCTACGTC
CTCGGGCTGC ACCTGACGCC GACGATCCCG GTCTGGCTGG CGCTGCTGTT CGGCGGGGTG
TTCTTCCTCC TGCCGGACCT GGAGGTGAAG GGGCAGGCCG CCGAGAAGCG CCGCGACTTC
CGCCGCGTGC TCGGCGCCTA CCTGGACCTG GTCGCGATGA ACCTGGCCGG CGGGCGCGGT
CTGCCCGAGG CGCTGATGGC GGCCGCCGAG GTCTCCGACG GCTGGGCGCT GCGCCGGATC
CGCGACGCGC TCACCGACGC CCGGGTCACC GGCATCTCGC AGTGGAACGC GCTGTCCCAG
CTCGGCGACG CCCTGGACGT CGACGAGCTC AAGGACCTCG GCGCCGCGCT GGCGCTGGTC
GCCGAGGACG GCGCGAAGGT GCGCGAGTCG CTGGCCGCGC GCGCCGAGAC GATGCGCCAC
CGCGAGCTGT CCGAGATCGA GGGCGCGGCC GGTGCGAAGT CGCAGTCCAT GCTCGTCGCG
CAGATGCTGC TGTGCGCGGG CTTCATGGTT TTCCTCCTGT ACCCGGCGAT GGCGCGGGTC
ATGGGCTCTA TCTAG
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| Protein sequence | MTYEVLAGAL VGLGLFLLIR ALIPGRPDPM AAIARIDALR QHTSLGPQQD QAPPKGLAKL
REDLGASMND FYIRQGWQIR SLRADLAILD RSVEQFLAAK LLLAALGIIF GPFVFAAVYV
LGLHLTPTIP VWLALLFGGV FFLLPDLEVK GQAAEKRRDF RRVLGAYLDL VAMNLAGGRG
LPEALMAAAE VSDGWALRRI RDALTDARVT GISQWNALSQ LGDALDVDEL KDLGAALALV
AEDGAKVRES LAARAETMRH RELSEIEGAA GAKSQSMLVA QMLLCAGFMV FLLYPAMARV
MGSI
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