| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_8204 |
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| Symbol | |
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| ID | 8339583 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 9515998 |
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| End bp | 9516909 |
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| Gene Length | 912 bp |
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| Protein Length | 303 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 644961290 |
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| Product | type II secretion system protein |
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| Protein accession | YP_003118868 |
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| Protein GI | 256397304 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4965] Flp pilus assembly protein TadB |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.480653 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 44 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACTCCG CTGTGTTCAA CCCCACCACG TTCGCCGCCA TCGGCGTCGG CGCGGCCGTC
GGCGGCGGCT TCGCGCTGCT GATCACCGCG ATCCGCGGCT TCCCGGCCAA GCCGGAGCAG
GCCTCCGGGC GCACCGCCGC CGACATCGTC AAGTTCCTGT CGACACGCGC CGCGGTCGCC
GTCGTGGCCG GCGCGGTGGT GCTGGCCGCG ACCCGCTGGC CGACCGCCGC GATCGCGGCC
GGCGTCCTGG TCTTCTTCTG GAACCAGCTG TTCGGCGGGC TGGCCGCCGA ACGCGCCGCG
CTGGCCCGGG TGGAGGCGCT GGCCGGCTGG ACCGAGAGCC TGCGCGACAC CATCGCCGGC
GCGGTCGGCC TGGAGCAGGC GATCCCGGCG ACCGCGCGCG CCGCGTCCCC GGCGATCCGC
GAGAACCTGC ACACCCTCGT GGACCGGCTG CGCGCCCGCA TGCCGCTGCC GCAGGCGCTG
GAGTACTTCG CCGACGACAT GGACGACGCC TCCGCCGACC TGGTCATCGC CGCGCTGATC
CTGAACGCCC GGCTGCGCGG CCCGGGTCTG CGCGAGGTGC TCGGCGCGCT CGCGCAGTCC
TCGCGCGAGG AGGTCGACAT GCGCCAGCGC GTCATGGCCC AGCGCAGCTC GACCCGGCGC
AGCGTGCAGA TCGTGGTCGG GGTGTCGGTC GCGGTGGTGC TGGGCCTGGC GGTCTTCAAC
AAGTCCTTCG TGCAGCCCTA CAGCACGGCC ACCGGCCAGC TGGTGCTGCT GGGGGTGATC
GGGCTGTTCG CGGCCGGATT CTTCTGGCTG CGCAAGCTGT CCTCGATCGA GACGCCGGCC
CGCTTCCTGC AGCGCGCGCG GACCGTCCCG GCCCATCCGG TCCCCGAGCA GCGGAGCGGT
GATCCGCGAT GA
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| Protein sequence | MDSAVFNPTT FAAIGVGAAV GGGFALLITA IRGFPAKPEQ ASGRTAADIV KFLSTRAAVA
VVAGAVVLAA TRWPTAAIAA GVLVFFWNQL FGGLAAERAA LARVEALAGW TESLRDTIAG
AVGLEQAIPA TARAASPAIR ENLHTLVDRL RARMPLPQAL EYFADDMDDA SADLVIAALI
LNARLRGPGL REVLGALAQS SREEVDMRQR VMAQRSSTRR SVQIVVGVSV AVVLGLAVFN
KSFVQPYSTA TGQLVLLGVI GLFAAGFFWL RKLSSIETPA RFLQRARTVP AHPVPEQRSG
DPR
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