Gene Caci_8185 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_8185 
Symbol 
ID8339564 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp9496350 
End bp9497255 
Gene Length906 bp 
Protein Length301 aa 
Translation table11 
GC content71% 
IMG OID644961271 
Productglycosyl transferase family 2 
Protein accessionYP_003118849 
Protein GI256397285 
COG category[R] General function prediction only 
COG ID[COG1216] Predicted glycosyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGAATCG CCGCCGTAGT GACGGCCTAC CACCCGGACG AGCGGCTGCT CGCGGTGGTC 
GACTCCGTCC AGGAGTCCTG CGCCGAGATC GTGGTCGTCG ACAACACCCC CGAAGGCGCC
ACGTCCGTCG CGGACAAGAT CGAGGACACC GCGACGATCA CGGTCCTGCG CTCCGGCGTG
AACCGCGGGC TGTCCCACGC CCTGAACCTC GGCGTCTCGC GCCTGTCGTC GGCCGTCGAG
GCGGTTATCT TCCTGGACCA GGACTCGGTC CTGGCGCCCG ACGTGGTCCC GCGCCTGGCG
GAGCACTTCA AGGACCCCGG CATCGGCGTC GCGACCCCCG CCCCCTGGGA CCCGGTCCAC
GAGCGCTTCT ACGAGACCTT CTCCGGCCGC CACGAAGACG TCGCCGACCG CGCCATCTCC
ATCACCTCCG GCATGCTCAT CCGCCGTGAC CTGCTGGCCC GCGTCGGGGA GTTCCGCGAG
GACTTCTTCG TCGACTACGC AGACCTCGAG TACTCCCTGC GCGTCCGCCG CACCGGCGCG
CGCATCGTCC AGGACAAGCG TCTGAAGCTC CCGCACTCCA TCGGCGAACG CCGCACCCAC
GCCTTCTTCG GCCTGCGCGT CCCGGTGACG CACAAGGCCG CCTGGCGCGA CTACTGGCAG
CTTCGCAATG GCCTGATCAC TGTGCGGGAG CAGGGCCGCT TCTCCCCAGC TTGGGCCGTG
ACGGCGGTGC TGTACCTGGG GCGCGCGGCG GTCCAGGCAG TGCTGTTCGA GGACGATCGG
CGCGCCCACG CGGGCGCGGT GGCGCGCGGG CTGCGGGACG GGATGACGCA GAAGTACAGC
TTGCAGTACC TGCCGAAGGG CGCGGAGCTG ACGGTGGATC CCGAGCGCGG GCGGCGGCAG
GGCTGA
 
Protein sequence
MRIAAVVTAY HPDERLLAVV DSVQESCAEI VVVDNTPEGA TSVADKIEDT ATITVLRSGV 
NRGLSHALNL GVSRLSSAVE AVIFLDQDSV LAPDVVPRLA EHFKDPGIGV ATPAPWDPVH
ERFYETFSGR HEDVADRAIS ITSGMLIRRD LLARVGEFRE DFFVDYADLE YSLRVRRTGA
RIVQDKRLKL PHSIGERRTH AFFGLRVPVT HKAAWRDYWQ LRNGLITVRE QGRFSPAWAV
TAVLYLGRAA VQAVLFEDDR RAHAGAVARG LRDGMTQKYS LQYLPKGAEL TVDPERGRRQ
G