Gene Caci_8179 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_8179 
Symbol 
ID8339558 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp9487433 
End bp9488332 
Gene Length900 bp 
Protein Length299 aa 
Translation table11 
GC content71% 
IMG OID644961265 
Productglycosyl transferase family 2 
Protein accessionYP_003118843 
Protein GI256397279 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0463] Glycosyltransferases involved in cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGGCA GCGACGCTGC GGTGATCGAA TTCCTCGTTC CCTACTACGG GAGCCCGGAG 
TACCTGCACC AGACGATCGC GAGCATCAGG GCCCTGGAAG ACACCGACTG GCGCCTGACC
GTCGTCGAGG ACGCCTACCC CGACGGGCTC GCCGTCGAGC GCTCCGTGCG CGCCCTCGAG
GACGACCGGA TCCGGTACCT GCGCAACGAG AAGAACCTCG GCAACAACGC CAACACCTAC
CGGTGCATCG AGCTCGCCGA GGGTGACTGG TTCGCCATGC CCGGCGCCGA CGACCTGGTG
AACCCGAACT ACGGCCGGGC GGTCGCCGAC CTGATCCGCC GCCACCCCGC CGCCGCGATG
GTCCAGCCCG CGGTCGAGGT GATCGACGAG GCCGGCGCCC CGCACTTCCC GCTCCCGGAC
AAGATCAAGC GCCTGACCCG CCCCGGCACC GGCGAGGTGG TCCTGGCCGG CGACGCCGGC
GCCGCGAGCC TGCTGCGCAG CAACTGGCTC TACACCCCGG CCTCCTGCTA CCGGCGCGAG
CACCTCCAGA AGGTGTCCTT CCGCGAAGGC ATCGACGCCG CACACGACCT GGCCTTCATC
GTGGACGTCA TCATGGCCGG CGGCGAGGTC GTGGCCGGCT CCGAGGTCGC CTTCCGCTAC
CGCCGCCACG GCTCCAGCCA CTCCAGCTCC TTCGCCCGCA GCGGCCGCCG CTTCGACCAG
GAACGCAAGT ACTTCGAGGA CATCCAGGCC GAGCTGAACG CCCTGCAGTG GAAGTCCGCC
GAGCGCGCGG CGCGACGGCG CCTGCTGTCC CGGCTCAACG CCCTGAGCCA ACTCCCGGGC
GCGGCGCTGG CTCGCGATAG CGGCGCGGCC AAGGCGATGC TGCGGCACGG GGTGCGGTAG
 
Protein sequence
MAGSDAAVIE FLVPYYGSPE YLHQTIASIR ALEDTDWRLT VVEDAYPDGL AVERSVRALE 
DDRIRYLRNE KNLGNNANTY RCIELAEGDW FAMPGADDLV NPNYGRAVAD LIRRHPAAAM
VQPAVEVIDE AGAPHFPLPD KIKRLTRPGT GEVVLAGDAG AASLLRSNWL YTPASCYRRE
HLQKVSFREG IDAAHDLAFI VDVIMAGGEV VAGSEVAFRY RRHGSSHSSS FARSGRRFDQ
ERKYFEDIQA ELNALQWKSA ERAARRRLLS RLNALSQLPG AALARDSGAA KAMLRHGVR