Gene Caci_8153 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_8153 
Symbol 
ID8339532 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp9454744 
End bp9455727 
Gene Length984 bp 
Protein Length327 aa 
Translation table11 
GC content72% 
IMG OID644961239 
Productagmatinase 
Protein accessionYP_003118817 
Protein GI256397253 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0010] Arginase/agmatinase/formimionoglutamate hydrolase, arginase family 
TIGRFAM ID[TIGR01230] agmatinase 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGAGCA CTGAAGGCGG CAGCACGGAA CGTCCGGCAC CGATAGGACC GGTCGACTCC 
TCGAAGACCC CGCGCTACGC GGGCTTCGCG ACGTTCGCGC GGCTGCCGCG CCTGGACCAG
CTCCCGGCGG GCGAGAAGGC GGACGTCGCG GTGCTGGGCG CCCCCTTCGA CTCCGGGGTC
TCCTATCGCC CCGGCGCCCG CTTCGCCCCG GCGGCGGTGC GCGAGGCCTC AAGGCTGCTG
CGGCCCTACA ACCCCGGCTT GGACTTCTCG CCGTTCGAGG CGGTGCAGGT CGCCGACGCC
GGCGACATCT CCATCAACCC CTTCCTGCTC GACGAGGCGC TGGAACAGAT CGAGGCGCAC
TCCGGCGAGC TGGTCGGCGC CGGCTCCAAG CTGGTGACCA TCGGCGGCGA CCACACCATC
GCCCTGCCGC TGCTGCGCAC CATGGCGCGC CGGCACGGTC CGGTGGCGCT GCTGCACTTC
GACGCGCACC TGGACACCTG GGACACCTAC TTCGGCGCGC CGTACACGCA CGGCACGCCG
TTCCGCCGCG CCTTCGAAGA AGGCATCCTC GACTCCTCGG CGGTGGCACA CGTCGGCACG
CGCGGCCCGC TCTACAGCAA ACAGGACCTC AGCGACGACC AGCGCATGGG CTTCGGCATC
GTGACGTCCG CGGACGTGAT GCGCCAGGGC GTGGACGCCG TCGTGCAGGC GCTGCGCGAG
CGGATCGGCA GCCGGCCGCT GTACGTCTCG ATCGACATCG ACGTCCTGGA CCCGGCGCAC
GCCCCCGGCA CGGGCACCCC CGAGGCCGGC GGCATGACCA GCCGCGAGCT GCTGGAGATC
CTGCGCGGCC TGGACGGGCT GAACCTCGTC GGCGCCGACG TGGTCGAGGT GGCGCCGCCG
TACGACCACG CCGAGATCAC CTCGGTCGCC GCCGCGCACG TCGCCTACGA CCTGGTGACG
CTGCTGGCGA TGCAAGGACG CTGA
 
Protein sequence
MASTEGGSTE RPAPIGPVDS SKTPRYAGFA TFARLPRLDQ LPAGEKADVA VLGAPFDSGV 
SYRPGARFAP AAVREASRLL RPYNPGLDFS PFEAVQVADA GDISINPFLL DEALEQIEAH
SGELVGAGSK LVTIGGDHTI ALPLLRTMAR RHGPVALLHF DAHLDTWDTY FGAPYTHGTP
FRRAFEEGIL DSSAVAHVGT RGPLYSKQDL SDDQRMGFGI VTSADVMRQG VDAVVQALRE
RIGSRPLYVS IDIDVLDPAH APGTGTPEAG GMTSRELLEI LRGLDGLNLV GADVVEVAPP
YDHAEITSVA AAHVAYDLVT LLAMQGR