| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_8125 |
|---|
| Symbol | |
|---|
| ID | 8339503 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | - |
|---|
| Start bp | 9421303 |
|---|
| End bp | 9422553 |
|---|
| Gene Length | 1251 bp |
|---|
| Protein Length | 416 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 644961210 |
|---|
| Product | threonine synthase |
|---|
| Protein accession | YP_003118789 |
|---|
| Protein GI | 256397225 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0498] Threonine synthase |
|---|
| TIGRFAM ID | [TIGR00260] threonine synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 48 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCGGCA CCCTCTCTAC GGCCGCCCCC TTCGGTTCGG CCGCGCACCT GTCCTGTCGT
GAGTGCGGCC ACACCACAGA CCTCGGCCCG ACCTTCGCCT GCGAAGAGTG TTTCGGCCCG
CTGGAGATCT CCTACGACTT CGGGACCGTC ACCCGCGAGC AGATCGAGGC CGGCCCGGCC
TCCATCTGGC GCTACGCCCC GCTGCTCCCG GTCCCGGCCG ACGTCGCCAC GCGGCCCACC
ACGAACCCCG GCTGGACCCG CCTGGTCCGC GCCACCAACC TCGGCCGCGA GCTCGGCCTG
ACGAACCTGC ACGTGAAGGA CGACTCCGGG AACCCGACGC ACTCCTTCAA GGACCGCGTC
GTGGCGATCG CCGTCCAGGC CGCCCACGCC TTCGGCTACA CCACCTTGTC CTGCTCCTCC
ACCGGCAACC TGGCCGGCGC GGTCGGCGCC GCGGCGGCGC GCGCGGGACT GGACTCCTGC
GTCTTCATCC CGTCGGACCT GGAGAAGGAG AAGATCGTCG TCGCCTCCGT CTACGGCGGC
CGGCTGATCG CCATCGACGG GACCTACGAC GAGGTGAACC GCTTCTGCAG CGAGCTGATC
GGCGACGAGC TCGGCGAGAA GTGGGGCTTC GTCAACGTCA ACCTGCGGCC GTACTACGCC
GAGGGCTCCA AGACGCTGGC GTACGAGATC GCCGAGCAGC TCGGCTGGCG GCTGCCGGAG
CAGATCGTGG TCCCGGTGGC CTCCGGATCG CAGCTCACGA AGATCGACAA GGGCTTCCGC
GAGCTGGTCA AGCTCGGCCT GGTCGAGGAC ACCCCCTACA AGGTGATCGG CGCCCAGGGC
TCCGGCTGCG CCCCTGTCTC GCAGGCGTAC AAGGACGGCA TCGACGTGAT CCGCCCGGTC
AGGCAGCCCG ACACCATCGC CAAGTCGCTG GCGATCGGCA ACCCGGCCGA CGGTCCCTAC
GTGCTGGACA TCGCCCGGCG CAGCGGCGGC ACGGTCGAGG ACGTGACCGA CGACGAGATC
CGCGCGGCCG TGAAGCAGCT GGCGCGCACC GAGGGCATCT TCGCCGAGAC CGCGGGCGGG
GTGACCGTCG GAGTGCTGAA GAAGCTCGCC GACGCCGGCC GGCTGGACCC CGAGGCGCTG
ACCGTGGTCA TCAACTCCGG CGACGGGCTG AAGACCCTCG ACGCGGTGTC CGACTGCGGG
CCCACGGCGA CCATCAAGCC GTCCCTGGAC GCCTTCCGCG CGACGCTCTG A
|
|---|
| Protein sequence | MSGTLSTAAP FGSAAHLSCR ECGHTTDLGP TFACEECFGP LEISYDFGTV TREQIEAGPA
SIWRYAPLLP VPADVATRPT TNPGWTRLVR ATNLGRELGL TNLHVKDDSG NPTHSFKDRV
VAIAVQAAHA FGYTTLSCSS TGNLAGAVGA AAARAGLDSC VFIPSDLEKE KIVVASVYGG
RLIAIDGTYD EVNRFCSELI GDELGEKWGF VNVNLRPYYA EGSKTLAYEI AEQLGWRLPE
QIVVPVASGS QLTKIDKGFR ELVKLGLVED TPYKVIGAQG SGCAPVSQAY KDGIDVIRPV
RQPDTIAKSL AIGNPADGPY VLDIARRSGG TVEDVTDDEI RAAVKQLART EGIFAETAGG
VTVGVLKKLA DAGRLDPEAL TVVINSGDGL KTLDAVSDCG PTATIKPSLD AFRATL
|
|---|
| |