Gene Caci_8106 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_8106 
Symbol 
ID8339484 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp9400260 
End bp9401768 
Gene Length1509 bp 
Protein Length502 aa 
Translation table11 
GC content70% 
IMG OID644961191 
Productmajor facilitator superfamily MFS_1 
Protein accessionYP_003118770 
Protein GI256397206 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2271] Sugar phosphate permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGAGG TACTCGGAGC GCAGCATCCG GACGCCGCGG CGGCCGATGG CGCGAGACGC 
GGGACGGCGA TCGGATCGCC GGGTCCGCTG CGGCCGATCT TCTCCGGCAG CTACCAGAAA
CTGTGGCTGC TGCTGCTGTT CGGCTGGCTC GTCAGCTACG CCGACCGGAC TGTCACCGGG
CCGGTCGTGG CGTGGATGAT CCACGACAAG GGCGGCTTCA TCGGCGACTC CGCGCACCCC
GCCGCGCTCG GCGGCTTGAT CGGCTCGATG TTCTTCACCG GCTACATGCT CACGCAGTAC
GCCGGCGGGC GCCTCGGCGA CCGCTTCGGG CATCGCGAGA TGCTCGTCCT CTCCTTGCTG
TGGGCCGGGG TTCTGACGCT GGTGTCGGGG CTGGCGACCG GGCTCGTGGT GTTCGTCGTG
GCGCGCGTGC TGACCGGTCT GGGCGAAGGC GTCTTCTACT CCAACGACCG CGTGCTGGTC
ATCACGCACA CGCCGCCCCG GCGCCGCACG ATCGGGCTCG GCGTGGCGGT GTCGGGACTG
TCCATCGGGC TGACCGTCGC CATCGTCGCC ACCCCGTACA TGATCGACTG GGGTACGTCG
GCGGGCTTCG GCGCCAGAGC GTGGAGCATG CCGCTGTTCC TGTTCGGCAC GTTCTCGCTG
CTGGTCGGCG TCGCCACCTG GCTGTTCTTC CGGGCCCGGG GCGATCGGCC GCTGCGGCTG
GGCGCGCCGT TGCTGCGCCT GATCGGCTAC TCCGTGCCCT GCGCCGCCGC GATCACGGTG
CTGTACCTGG TCTCGGACAA GGCCGGATGG ACGGCGTGGG AGACCGCGAT CGGCTCCGGG
GTGCTGGCGC TGGTGATGAT CGGCTTCGTG GTCCGGGACC TGAAGCGGAC CGGCAAGGCG
GAAACGCTGC TGACGAAGGA CTTGTGGCTG CTGTACATCG CCTTCATCGC GGTGATGTGG
AACCTGTGGT TCTTCTCCTT CTGGTCGGTC GAGATCGTCG CGGAGACCGC GCACAGCAGC
CTGACCTCCG CCGCGCTGAC GGCCGCGTTC AACGCCGGCG CCGGCATCAT CGGCTTCCCG
GTCGGCGGCT GGCTGGCCGA CCGGCGGGTG CGGCAGGGCA AGGGCCGCAA GTCGCTGGCG
ATCATCTGCG CCGTGGCGCA CACGCTGCTC GCCGTCGCCT TCGGCGTCTC GCTCGCGGTC
GGGCATCCCT CGCTGCTGTT GCTCGGGCTG ATCCTGTTCA CCTCGGGGCT GTTCTTCAAC
GCGCTGCAGC CGATCGTCCA CGGCATCCTG GGCGACCAGG TCCCGGACGC GGACCGGGGC
GCGGTGTTCG GCGTGTTCAA CCTGATCGCC GAAATCGGCG CGGTCGCCAG CCCGGTGGTC
AGCGGGGTGC TGCGGGACTC CACCGGGAGC TGGGCGCCGG GGGTGTTCAC GGCCGCCGGA
ATCATGGCCG TGTCGGTGCC GTTGTACGCG CTGGTGCGCG AGCGGATACC GGGTGCCGCC
CGGACGTGA
 
Protein sequence
MSEVLGAQHP DAAAADGARR GTAIGSPGPL RPIFSGSYQK LWLLLLFGWL VSYADRTVTG 
PVVAWMIHDK GGFIGDSAHP AALGGLIGSM FFTGYMLTQY AGGRLGDRFG HREMLVLSLL
WAGVLTLVSG LATGLVVFVV ARVLTGLGEG VFYSNDRVLV ITHTPPRRRT IGLGVAVSGL
SIGLTVAIVA TPYMIDWGTS AGFGARAWSM PLFLFGTFSL LVGVATWLFF RARGDRPLRL
GAPLLRLIGY SVPCAAAITV LYLVSDKAGW TAWETAIGSG VLALVMIGFV VRDLKRTGKA
ETLLTKDLWL LYIAFIAVMW NLWFFSFWSV EIVAETAHSS LTSAALTAAF NAGAGIIGFP
VGGWLADRRV RQGKGRKSLA IICAVAHTLL AVAFGVSLAV GHPSLLLLGL ILFTSGLFFN
ALQPIVHGIL GDQVPDADRG AVFGVFNLIA EIGAVASPVV SGVLRDSTGS WAPGVFTAAG
IMAVSVPLYA LVRERIPGAA RT