Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_8106 |
Symbol | |
ID | 8339484 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 9400260 |
End bp | 9401768 |
Gene Length | 1509 bp |
Protein Length | 502 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 644961191 |
Product | major facilitator superfamily MFS_1 |
Protein accession | YP_003118770 |
Protein GI | 256397206 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2271] Sugar phosphate permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 41 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGAGG TACTCGGAGC GCAGCATCCG GACGCCGCGG CGGCCGATGG CGCGAGACGC GGGACGGCGA TCGGATCGCC GGGTCCGCTG CGGCCGATCT TCTCCGGCAG CTACCAGAAA CTGTGGCTGC TGCTGCTGTT CGGCTGGCTC GTCAGCTACG CCGACCGGAC TGTCACCGGG CCGGTCGTGG CGTGGATGAT CCACGACAAG GGCGGCTTCA TCGGCGACTC CGCGCACCCC GCCGCGCTCG GCGGCTTGAT CGGCTCGATG TTCTTCACCG GCTACATGCT CACGCAGTAC GCCGGCGGGC GCCTCGGCGA CCGCTTCGGG CATCGCGAGA TGCTCGTCCT CTCCTTGCTG TGGGCCGGGG TTCTGACGCT GGTGTCGGGG CTGGCGACCG GGCTCGTGGT GTTCGTCGTG GCGCGCGTGC TGACCGGTCT GGGCGAAGGC GTCTTCTACT CCAACGACCG CGTGCTGGTC ATCACGCACA CGCCGCCCCG GCGCCGCACG ATCGGGCTCG GCGTGGCGGT GTCGGGACTG TCCATCGGGC TGACCGTCGC CATCGTCGCC ACCCCGTACA TGATCGACTG GGGTACGTCG GCGGGCTTCG GCGCCAGAGC GTGGAGCATG CCGCTGTTCC TGTTCGGCAC GTTCTCGCTG CTGGTCGGCG TCGCCACCTG GCTGTTCTTC CGGGCCCGGG GCGATCGGCC GCTGCGGCTG GGCGCGCCGT TGCTGCGCCT GATCGGCTAC TCCGTGCCCT GCGCCGCCGC GATCACGGTG CTGTACCTGG TCTCGGACAA GGCCGGATGG ACGGCGTGGG AGACCGCGAT CGGCTCCGGG GTGCTGGCGC TGGTGATGAT CGGCTTCGTG GTCCGGGACC TGAAGCGGAC CGGCAAGGCG GAAACGCTGC TGACGAAGGA CTTGTGGCTG CTGTACATCG CCTTCATCGC GGTGATGTGG AACCTGTGGT TCTTCTCCTT CTGGTCGGTC GAGATCGTCG CGGAGACCGC GCACAGCAGC CTGACCTCCG CCGCGCTGAC GGCCGCGTTC AACGCCGGCG CCGGCATCAT CGGCTTCCCG GTCGGCGGCT GGCTGGCCGA CCGGCGGGTG CGGCAGGGCA AGGGCCGCAA GTCGCTGGCG ATCATCTGCG CCGTGGCGCA CACGCTGCTC GCCGTCGCCT TCGGCGTCTC GCTCGCGGTC GGGCATCCCT CGCTGCTGTT GCTCGGGCTG ATCCTGTTCA CCTCGGGGCT GTTCTTCAAC GCGCTGCAGC CGATCGTCCA CGGCATCCTG GGCGACCAGG TCCCGGACGC GGACCGGGGC GCGGTGTTCG GCGTGTTCAA CCTGATCGCC GAAATCGGCG CGGTCGCCAG CCCGGTGGTC AGCGGGGTGC TGCGGGACTC CACCGGGAGC TGGGCGCCGG GGGTGTTCAC GGCCGCCGGA ATCATGGCCG TGTCGGTGCC GTTGTACGCG CTGGTGCGCG AGCGGATACC GGGTGCCGCC CGGACGTGA
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Protein sequence | MSEVLGAQHP DAAAADGARR GTAIGSPGPL RPIFSGSYQK LWLLLLFGWL VSYADRTVTG PVVAWMIHDK GGFIGDSAHP AALGGLIGSM FFTGYMLTQY AGGRLGDRFG HREMLVLSLL WAGVLTLVSG LATGLVVFVV ARVLTGLGEG VFYSNDRVLV ITHTPPRRRT IGLGVAVSGL SIGLTVAIVA TPYMIDWGTS AGFGARAWSM PLFLFGTFSL LVGVATWLFF RARGDRPLRL GAPLLRLIGY SVPCAAAITV LYLVSDKAGW TAWETAIGSG VLALVMIGFV VRDLKRTGKA ETLLTKDLWL LYIAFIAVMW NLWFFSFWSV EIVAETAHSS LTSAALTAAF NAGAGIIGFP VGGWLADRRV RQGKGRKSLA IICAVAHTLL AVAFGVSLAV GHPSLLLLGL ILFTSGLFFN ALQPIVHGIL GDQVPDADRG AVFGVFNLIA EIGAVASPVV SGVLRDSTGS WAPGVFTAAG IMAVSVPLYA LVRERIPGAA RT
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