| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_8097 |
|---|
| Symbol | |
|---|
| ID | 8339475 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | + |
|---|
| Start bp | 9391957 |
|---|
| End bp | 9392352 |
|---|
| Gene Length | 396 bp |
|---|
| Protein Length | 131 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 644961182 |
|---|
| Product | cold-shock DNA-binding domain protein |
|---|
| Protein accession | YP_003118761 |
|---|
| Protein GI | 256397197 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1278] Cold shock proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 44 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCCTACCG GCAAGATCAA GTGGTACGAC ACCGAAAAGG GTTTCGGCTT CATCACCCGC
GACGACGGGC CCGACGTGTT CATGCACTCC TCCGCGCTGC CCGCGGGCAC CGCGGAGCTC
AAGAGCGGCC AGCGGGTCGA GTTCGGGGTG GCCGCCGGCA AGCGCGGCGA CACCGCGATA
GGCGTGAAGC TGCTCGAGAC CCGGCCGAGC GTGGAGGCCG CGGTGGCGGC CCGCGACCGC
AAGCCGGCCG AGGAGATGGT GGTCATCGTC GAGGACGTGA TGAAGCTGCT CGACGGCATG
TCGGAGACCT TCCGCCGGGG CAAGTACCCG GACAAGGCCA CCTCGCGCAA GCTCGCCGGG
GTGCTGCGCG CCGTCGCCGA CCAGCTGGAG AGCTGA
|
|---|
| Protein sequence | MPTGKIKWYD TEKGFGFITR DDGPDVFMHS SALPAGTAEL KSGQRVEFGV AAGKRGDTAI
GVKLLETRPS VEAAVAARDR KPAEEMVVIV EDVMKLLDGM SETFRRGKYP DKATSRKLAG
VLRAVADQLE S
|
|---|
| |