| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_8062 |
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| Symbol | |
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| ID | 8339440 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 9357904 |
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| End bp | 9358794 |
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| Gene Length | 891 bp |
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| Protein Length | 296 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644961147 |
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| Product | protein of unknown function DUF178 |
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| Protein accession | YP_003118726 |
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| Protein GI | 256397162 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1427] Predicted periplasmic solute-binding protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.110176 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGACGACA TCTCCGACGC GCGGCTAGAA GCGCACCTCT CCCAGTGCCG GCGGCGACCC
CGCGTCGGGC ACATCCAGTT CCTCAACTGT CTGCCGATCT ACTGGGGCCT GGTCAACTCC
GGCGCGATCC TCGACATGGA GCTGATCAAG CAGAGCCCTG ACGTGCTCTC CCACATGCTC
GTCGACGGCG ACCTCGACAT CGGCCCGATC AGCCTGGTCG AGTACCTGCG CAACGCCGAG
GACCTGGTGG TCCTGCCCGA CGTCGCGGTC GGCAGCGACG GCCCGGTGAC CAGCTGCAAC
CTGGTCAGCA AGGTCCCCTT CGAAGACCTC GACGGCGCCC GCGTGGCCCT GGGCTCGACC
AGCCGCACCA CGGTCCAGCT GGCCCAGCTC ATCCTGCGCG AGAAGTACGG CGTCCGCCCC
GACTACTTCC ACTGCGCCCC CGACCTGGAG CTGATGCTCC GCGAGGGCGA CGCCGGCGTG
ATCATCGGCG ACCCCGCCCT GCGCGCCTGG CTCTACGACT CCCACCGCCT CGGCACCCAC
CTGCTGGACC TGGGCCAGGC CTGGAAGGAC TGGACCGGCC TGCCGATGGT CTTCGCGGTC
TGGGCGGTCC GCAAGGAGTA CCTGGAGCGC TGCCCGGACA TCGTCCACGA GGTGCACCGG
GGCTTCCTGC GCTCCCGCGA CATCTCCCTG GAGCACGTCG ACAAGGTGGC GCGCCAGGTC
GAGCGCTGGG AGCAGTTCCC GGCGGCGCAG CTGGAGGACT ACTTCACGAC GCTGGACTTC
TCCCTCGGAG AGCGCCAGCT CGAGGGCCTG CGGGAGTTCG CCCGCCAGGT CGGCGACCAG
ATCGGGGTGC TGGACGTCCC GGAGGTCGTG CTCCTGCCGC GGCAGGACTG A
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| Protein sequence | MDDISDARLE AHLSQCRRRP RVGHIQFLNC LPIYWGLVNS GAILDMELIK QSPDVLSHML
VDGDLDIGPI SLVEYLRNAE DLVVLPDVAV GSDGPVTSCN LVSKVPFEDL DGARVALGST
SRTTVQLAQL ILREKYGVRP DYFHCAPDLE LMLREGDAGV IIGDPALRAW LYDSHRLGTH
LLDLGQAWKD WTGLPMVFAV WAVRKEYLER CPDIVHEVHR GFLRSRDISL EHVDKVARQV
ERWEQFPAAQ LEDYFTTLDF SLGERQLEGL REFARQVGDQ IGVLDVPEVV LLPRQD
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