Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_8047 |
Symbol | |
ID | 8339425 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 9339399 |
End bp | 9340097 |
Gene Length | 699 bp |
Protein Length | 232 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 644961132 |
Product | histone family protein DNA-binding protein |
Protein accession | YP_003118711 |
Protein GI | 256397147 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0776] Bacterial nucleoid DNA-binding protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.278826 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACAAGG CCCAGCTGAT CGAGGCCGTC GCCGACAAGC TCGCCGCGTC CAAGAAGGAC GCCGGGGACG CGGTCGACGC GGTCCTGGAC GCGATCATCG CCTCGGTGGC CTCGGGGACC AAGGTCTCCA TCACCGGATT CGGCTCCTTC GAGAAGGTCA AGCGCCCGGC GCGCACCGCC CGCAACCCCC GCACCGGCGA GTCGGTGAAG GTCAAGGCCT CCTCGGCGCC GAAGTTCAAG GCGGGCCAGG GCTTCAAGGA CATGGTCAAC GGCGACAAGA AGGCCCCCGC GGCCGCCAAG TCCGCCGCCA AGAAGACCAC CGCCAAGGCC ACCGCCAAGA AGGCGGCTCC GGCCAAGAAG ACCGCGGTCA AGGCGACCGC CGCCAAGAAG ACCACCGCCA AGAAGACCAC CGCCAAGGCC ACCGCCAAGA AGGCGGCCCC GGCCAAGAAG ACCACCGCCG CCCGCAAGGC CACCCCGGCC AAGAAGGCCA CCGCCAAGAA GGCCACCGTG GTCAAGGCGG CGGCCAAGAA GGCCGCCACC GCCAAGAAGG CCCCCGCCAA GAAGGCCACC CCCGCCAAGA AGGCGGCAGC CCGCCCCGTC GCCAAGAAGG TCGCCAAGGC CCCCGCCAAG AAGGCCGCCC CCGCCAAGCG CACCACCACC AAGAAGGCCC CGGCCAAGAA GACCGCCGCC AAGCGCTAG
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Protein sequence | MNKAQLIEAV ADKLAASKKD AGDAVDAVLD AIIASVASGT KVSITGFGSF EKVKRPARTA RNPRTGESVK VKASSAPKFK AGQGFKDMVN GDKKAPAAAK SAAKKTTAKA TAKKAAPAKK TAVKATAAKK TTAKKTTAKA TAKKAAPAKK TTAARKATPA KKATAKKATV VKAAAKKAAT AKKAPAKKAT PAKKAAARPV AKKVAKAPAK KAAPAKRTTT KKAPAKKTAA KR
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