Gene Caci_8001 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_8001 
Symbol 
ID8339379 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp9287491 
End bp9288954 
Gene Length1464 bp 
Protein Length487 aa 
Translation table11 
GC content73% 
IMG OID644961086 
Producthypothetical protein 
Protein accessionYP_003118665 
Protein GI256397101 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGGCA AGCCGCCCAA CGAACTCCTC AATTCTTGGT TCCAGCGTTC CGGGTGGTCG 
AAGGGGGAAC TGGCGAGACT GGTCAACAAA CGCGCCAGAC AGCTGGGGGC GGCCCACGTC
TCCACCGACA CCTCGCGCGT ACGCCGCTGG CTCGACGGCG AGCACCCCCG CGACCCCGCC
CCGCGCATCC TCGTCGAACT CTTCTCCGAG CGCTTCGGCA CCGTCATCAC GCACGCCGAG
CTCGGCCTGC GCGAGCCCGC CGCGCCGCCG GCCACCTCCG GGGTGGACCT GCCGTGGGCC
GGGCGGCGCT CGATCGAGCT GCTCGGCGAC TTCGCCCGCA GCGACCTGAT GCTCAACCGC
CGCGGCTTCC TGGGCACCTC GCTGTCGCTG TCCGCCGGCC CGTCGCTGAT CGAGCCGATG
AAGCGCTGGC TCAGCCCGGT CCCGGAGCAG CACTCCGTCA ACGGCCGGCT GCCCGGCCGG
GTCACCGCCG AGGAGATGGA CCGCCTGGAG GAGACCACGC GCCTGTTCCG CGGCTGGGAC
GCGCAGTGCG GCGGCGGCCT GCGCCGCATG GCCGTGGTCG GGCAGTTGCA CGAAGTCACC
GAGCTGTTAC GGGACAACTA CGCCCCGGCC CTGTCGGAGC GCCTGTTCCG CACCGCCGCG
GAATTGGCGC TCCTCGCCGG TTGGATGGCC TACGACATCG GCATGCAGCC CTCGGCCCAG
CGCTACTTCG TCCTCGCCCT GCACGCCGCC CGCGAGGCCG GCGACACCCC GCTGGGCGCG
CTCGTCCTGG CGACCATGTC CCGCCAGATG ATCCACATCA ACCGCCCGCA GGACGCCCTG
GAACTGGTCC ACCTGGCCCA GTACGGCAGC CACGGCACCA CCACCGCGCG CGTGCAGTCG
CTGCTGGCCG CGATGGAGGC GCGCGCCTAC GCCAACCTCG GCGACAGCGA CAACTGCCGC
CGCGCCGTGG CCGCCGCCGA GGACCTGTTC CCCGGCGACT TCCCCGCCGG GCAGGACCGA
GCCGAGCGCG GGAGCAACGG CGCCGGCGGC GACCGCACCC GCGGCGGCGA CCCGTCGTGG
ATAGCGTTCT TCACCGAGGC CGAGCTCTAC GGCGAGAACG GCCACTCCTT CCGCGACCTG
GCGTATCGCT ATCCGCAGCT CACCGAGCAG GCGGCGAAGA ACATCGACCG GGCCGTGGAA
CTGCTCTCGG CCGACGACTC CTATCTGCGC AGCCGCGCGC TGAACGTGGT CGGGATGGCG
ACGGTCCGGC TCCAGCAGCG CGAGCCGGAG GCGGCGGTCG CCTACCTGCA CGGCGGCGCC
GAGCTGGTGC AGCGGCTGCG CTCCAAACGG GTCGAAGACC GGCTGCGGAC GACCGCGGGC
AACCTGTTCG CGCGCTATCC GGACGTCCGA TCGGTCCGCG AGGTCCACGA GCGCACGCTG
GCGGTGCTGC CCGCCGCGGC GTGA
 
Protein sequence
MTGKPPNELL NSWFQRSGWS KGELARLVNK RARQLGAAHV STDTSRVRRW LDGEHPRDPA 
PRILVELFSE RFGTVITHAE LGLREPAAPP ATSGVDLPWA GRRSIELLGD FARSDLMLNR
RGFLGTSLSL SAGPSLIEPM KRWLSPVPEQ HSVNGRLPGR VTAEEMDRLE ETTRLFRGWD
AQCGGGLRRM AVVGQLHEVT ELLRDNYAPA LSERLFRTAA ELALLAGWMA YDIGMQPSAQ
RYFVLALHAA REAGDTPLGA LVLATMSRQM IHINRPQDAL ELVHLAQYGS HGTTTARVQS
LLAAMEARAY ANLGDSDNCR RAVAAAEDLF PGDFPAGQDR AERGSNGAGG DRTRGGDPSW
IAFFTEAELY GENGHSFRDL AYRYPQLTEQ AAKNIDRAVE LLSADDSYLR SRALNVVGMA
TVRLQQREPE AAVAYLHGGA ELVQRLRSKR VEDRLRTTAG NLFARYPDVR SVREVHERTL
AVLPAAA