| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_7993 |
|---|
| Symbol | |
|---|
| ID | 8339371 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | - |
|---|
| Start bp | 9275748 |
|---|
| End bp | 9277127 |
|---|
| Gene Length | 1380 bp |
|---|
| Protein Length | 459 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 644961078 |
|---|
| Product | zinc finger SWIM domain protein |
|---|
| Protein accession | YP_003118657 |
|---|
| Protein GI | 256397093 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 37 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAAGCAG AGCGGCGCGT AGCGTCTCCT CAACGGGCGG TGGTGGGAGG CGGGCGGGGA
GAACGTTGGA CCGCAGCCCA GGTCAACTCT CTGGCCCCGG ACGCCGCGTC GCAGAAGGCG
GGCGCGAAGC TCGGGGTTCC GGGTCCGTGG TCGGGCACCG GGTATCTGGA CTCCGAGCGG
TTGTTGTGGG GGGACTGCAA AGGCAGCGGG AGCAAGCCGT ACCAAGTGAC CGTCTCCGTG
GCGGACTCGG ACACGGCGTA TCAATGCACC TGTCCCAGTA GGAAGTTCCC GTGTAAGCAC
GCGCTCGGCC TGCTGCTGTT GTGGGCGGCG GGTTCGATCG CGGAGACCGA CGTGCTTCCC
GAGCGCGTCG AGGTCTGGGC GGAGTCCCGG CGCGACCGGG CGGAGAAGTC CGCGGCCCGC
AGCGCCGCCA AGGCCGAGAA GGTCGCCGCC GACCCCGAGG GCGCCGCCAA GCGCGCCGCG
CAGCGGGCCG AGCGGATCGG CAACGGCCTG GCCGACCTCG ACCGCTGGCT CACCGACCAG
ATCGCGGCCG GCATCAGCGA CTCCGCGACG CTGTCCTACA GCGCCGTGGA CCCGGTCGCC
AAGCGGCTCG TGGACGCGCA GGCGCCCGGC GTGGCGGGCC GGGTCCGGAC CCTGGCCTCC
GCGCGCTCCT CCTCCGGCGA CGCCTGGCCG GACGCGGTCC TGGCCGAGTT CGCCCGGCTG
CACCTGCTGT GCCAGGCCTG GACCCGGCTG GCCGAGCTGC CGCCGGCGAT GCAGGACACC
GTGCGGCGGC GGATCGGGAT CTCGGTGGAC GCCGACGCGG TGCGCCGCGA CGGCGAGCGG
GTCGCCGACC GCTGGCACGT CCTGGGCTCC CGCGACCGCG CCGCCGACAA ACTCACCGAG
CGCCGGATCT GGCTGCGCGG CGCCGAGAGC GGCCGGACCG CGATGCTGCT GGCCTTCGGC
GCCATGCAGC AGGCGCCGGC GCTGGCGCTG CCGGTCGGCG CCGTCTATCA GGCCGAGATG
GTGTTCCACT CCGAGGTGCT TCCGCTGCGG GCGCAGATGG AGACCGGGGA AATCGCCACG
ATGGGAGCCT CGCCGGCCGG CGCGACCTTG CAGGCCGCGG CCGACGCCTT CGCCGACGCC
CTGGCCGCCG ATCCATGGCA GGACGGCTGG CCGGTCGTCG TCGCGGACGC GGTCCCGGAC
CGGGACGGCG AACTCGCCGA CGCCGAGGGC CGCCGCGTCC CGCTGATCTG CGAGGACGCC
GCCCTGTGGC GGCTGCTCGC GGTCTCCGGC GGGCATCCGG TGACCGTGTT CGGCGAGTAC
ACCGACGCGG GGCTGCAACC GCTCACCGTC TGGGCCGCCG AGGCGGCGGT CGCGCTGTGA
|
|---|
| Protein sequence | MQAERRVASP QRAVVGGGRG ERWTAAQVNS LAPDAASQKA GAKLGVPGPW SGTGYLDSER
LLWGDCKGSG SKPYQVTVSV ADSDTAYQCT CPSRKFPCKH ALGLLLLWAA GSIAETDVLP
ERVEVWAESR RDRAEKSAAR SAAKAEKVAA DPEGAAKRAA QRAERIGNGL ADLDRWLTDQ
IAAGISDSAT LSYSAVDPVA KRLVDAQAPG VAGRVRTLAS ARSSSGDAWP DAVLAEFARL
HLLCQAWTRL AELPPAMQDT VRRRIGISVD ADAVRRDGER VADRWHVLGS RDRAADKLTE
RRIWLRGAES GRTAMLLAFG AMQQAPALAL PVGAVYQAEM VFHSEVLPLR AQMETGEIAT
MGASPAGATL QAAADAFADA LAADPWQDGW PVVVADAVPD RDGELADAEG RRVPLICEDA
ALWRLLAVSG GHPVTVFGEY TDAGLQPLTV WAAEAAVAL
|
|---|
| |