Gene Caci_7975 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_7975 
Symbol 
ID8339353 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp9252391 
End bp9253629 
Gene Length1239 bp 
Protein Length412 aa 
Translation table11 
GC content73% 
IMG OID644961060 
Productamidohydrolase 
Protein accessionYP_003118639 
Protein GI256397075 
COG category[R] General function prediction only 
COG ID[COG1473] Metal-dependent amidase/aminoacylase/carboxypeptidase 
TIGRFAM ID[TIGR01891] amidohydrolase 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCTACA CCGATGACGC CAAGGGCTTG CAGGAGGACC TGGTCCGGCT GCGCCGCGAC 
CTGCACCGGA TACCGGAGAT CGGCCTGAAC CTGCCCCGCA CCCAGGAGCG GGTCCTGGCC
GCGCTCGACG GCCTGCCGCT GGAGATCACG CTGGGCTCGG AGCTGAACTC GGTGACGGCC
GTGCTGCGCG GGACCGGCCC GGCGGCCGGC GGCGAGGGCT CGGCGCGGGC CGAGGGCTCG
GCGCAGCCCC AGAAGCAGGC GGTGCTGCTG CGCGGGGACA TGGACGCGCT GCCGGTGGTG
GAGAAGACCG GGCGGGACTT CGCCGCCGCC GGTCCGAACA TGCACGCCTG CGGCCACGAC
CTGCACACCG CCATGCTGGT CGGCGCGGCG CGGCTGCTGT CGGGGCGCCG CGACCGGCTG
GCCGGCGACG TGGTGTTCAT GTTCCAGCCC GGCGAGGAGG GCGACGACGG CGCCGGGCAC
ATGATCCGCG AGGGGGTGCT GGACGCCGCC GGACCGCGCG TGATCGGCGC CTACGGCCTG
CACGTGATGT CCGACCGCCT CCCGCGCGGG CAGTTCGTCT CCCGCGCCGG CACCTTCATG
GCCGGCGCCG ACGAGATCGC GGTGACGGTG CGCGGCGCCG GCGCGCACGG CTCGCTGCCG
CACACCGGCA AGGACCCGAT ACCGGTGGCC TGCGAGATGG TCGTGGCGCT GCAGAGCATG
GTGACGCGCA AGTTCGACAT CTTCGACCCG GTGGTGATCA CCGTCGGGGC GTTCCAGGCG
GGCACCGCGG CGAACATCAT CCCGGACGAC GCCACCTTCC AGGTGACGAT GCGCTCGTTC
TCCCGCGAGT CCCGCGCCCG GATGCTGGAC GTGGTGGTGG ACCTGTTCAA CGGACTCGCC
GCGGCCTACG GCTGCGGGGT GGACATCACC TACAAGGAGC AATACCCGCC GACCGTGAAC
CACGCCCCCG AGGTCGACTT CCTGGAGGAG GTCACGCGCG AGGTGCACGG CGAGGAGCGC
TTCGCCCGGA TCCCCAACCC GGTCCCCGGC GCCGAGGACT TCTCCCGGGT GCTGGAGGAG
GTGTCGGGGA CCTACGCCTT CCTCGGCGCG TGCACCGTGG AGGACTTCGC GAGCTCGCCG
TCGAACCACA GCCCGCTGGC CGACTTCGAC GACGCGGTGC TCGGCGACGG CGCGGCGCTG
CTCGCCGAGC TCGCCGACCG GCGGCTCGCG CGCGGCTGA
 
Protein sequence
MTYTDDAKGL QEDLVRLRRD LHRIPEIGLN LPRTQERVLA ALDGLPLEIT LGSELNSVTA 
VLRGTGPAAG GEGSARAEGS AQPQKQAVLL RGDMDALPVV EKTGRDFAAA GPNMHACGHD
LHTAMLVGAA RLLSGRRDRL AGDVVFMFQP GEEGDDGAGH MIREGVLDAA GPRVIGAYGL
HVMSDRLPRG QFVSRAGTFM AGADEIAVTV RGAGAHGSLP HTGKDPIPVA CEMVVALQSM
VTRKFDIFDP VVITVGAFQA GTAANIIPDD ATFQVTMRSF SRESRARMLD VVVDLFNGLA
AAYGCGVDIT YKEQYPPTVN HAPEVDFLEE VTREVHGEER FARIPNPVPG AEDFSRVLEE
VSGTYAFLGA CTVEDFASSP SNHSPLADFD DAVLGDGAAL LAELADRRLA RG