Gene Caci_7960 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_7960 
Symbol 
ID8339338 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp9236529 
End bp9237431 
Gene Length903 bp 
Protein Length300 aa 
Translation table11 
GC content71% 
IMG OID644961045 
Productalpha/beta hydrolase fold protein 
Protein accessionYP_003118624 
Protein GI256397060 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCCGCA CAGTCCGCAC CCCGGACGGC CGCCGCCTGG CCGTCTGCCA GCGCGGCGAC 
CCTGATGGCG CCCCGGTGAT GCTGTTCCAC GGCACGCCCG GCAGCCGCCT GGGTCCAGTG
CCCCGGCCGA TGACGTTGCA CGCGTCTGGT ATCCGCCTTC TGACGTTTGA CCGGCCGGGC
TTCGGCGAGT CGGACCGGCA GCCGGGGCGT ACTGTCGCCT CGGTCGCGGC GGATGCCTGT
TCCATCGCCG ATGCGCTGGG CATCGATCGC TTCGCGGTGC TCGGCCGCTC CGGTGGCGGT
CCGCATGCAC TGGCCTGCGC GGCCCTGCTC CCGGAGCGGG TGACGCGGGC GGCGGCGATG
GTGGCGCTGG CGCCGCGCGA TGCGATGGGT GCTGAGTGGT TCGCTGGTAT GACGCCCGGG
AATGTCGAGG CGTACACACA GGCCTTCGCG AATCCCGAAG CGCTGCGTCG GGTGCTGGAT
GACCGCGCGG CGCGCATGCG TGCCGATCCG GCGAGTTTGT TGGCGAACAT TGATGAGGGC
TTGGAGCCGA CGGACCGCGC GGTGATCGGG CAGGCGAATA TCCGCCACGA GCTTGTTGCC
GCCTATGCCG CTGCGGTCTC GCGTTCGGCG GATGGCTGGT ACGACGATGC GCTCGCGCTT
GCGGCGCCTT GGGGCTTCGA CCCTGCGGAC ATCCGCGTGC CGGTGTACTT GTGGCACGGT
GCGGAGGACC GCTTCTCGCC GGTCAGCCAC ACCAGGTGGC TGGGCGAGCG GATCTCCCGC
GCGACGGTCG ATCTGGAGCC GCGCGCGTCG CATTTCAGCG CACTGTTGCG GATGCCCCAG
GTGATCGTCT GGTCGGGAGC ACGGGTGTCG TGGGATGCGG CGGTCGCACT GGGCGGCGGC
TGA
 
Protein sequence
MIRTVRTPDG RRLAVCQRGD PDGAPVMLFH GTPGSRLGPV PRPMTLHASG IRLLTFDRPG 
FGESDRQPGR TVASVAADAC SIADALGIDR FAVLGRSGGG PHALACAALL PERVTRAAAM
VALAPRDAMG AEWFAGMTPG NVEAYTQAFA NPEALRRVLD DRAARMRADP ASLLANIDEG
LEPTDRAVIG QANIRHELVA AYAAAVSRSA DGWYDDALAL AAPWGFDPAD IRVPVYLWHG
AEDRFSPVSH TRWLGERISR ATVDLEPRAS HFSALLRMPQ VIVWSGARVS WDAAVALGGG