| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_7949 |
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| Symbol | |
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| ID | 8339327 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 9221571 |
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| End bp | 9222686 |
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| Gene Length | 1116 bp |
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| Protein Length | 371 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644961034 |
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| Product | succinyl-diaminopimelate desuccinylase |
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| Protein accession | YP_003118613 |
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| Protein GI | 256397049 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
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| TIGRFAM ID | [TIGR01900] succinyl-diaminopimelate desuccinylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGGCC TGGACCTCAC ACAGAGCGCC GCCCGCCTCA CCGCGGCGCT CGTCGACATC
GAATCCGAGA GCGGGAACGA GAAGGCGCTC GCCGATGCAG TCGAGGAGGC GCTGCGCAAG
TATCCGCATC TGGAAGTACT GCGCGACGGC GACTCGGTGC TGGCGCGCAC CAACCTCGGC
CGCGCCGAGC GCGTGATCCT GGCCGGGCAC CTGGACACCG TGCCGATCGC CGTGGACAGC
ACGGGGCGCC GCAACGTCCC CTCGCTCCTT CAGGGCGACT GGGAGACCGG CACGCTGCGC
GGCTGCGGCA CCTCGGACAT GAAGGCCGGC GTCGCGGTCC AGCTGGTGCT GGCCGCCACC
CTCGCCGAGC CGAACCGCGA TGTGACGTAC GTGTTCTACG AGTGCGAGGA AGTCGAGGCC
GAGCGCAACA GCCTGGGCCG GCTGATCCGC ACCCGCCCGG AGTGGTTCGC CGCCGACTTC
GCGGTGCTGC TCGAGCCGAG CAACAACATC GTCGAGGGTG GCTGCCAGGG CACGATGCGC
GCCCGGCTGA CCTTCCGCGG CGCCCGCGCG CACTCGGCGC GCTCCTGGCT CGGCGACAAC
GCGATCCACA AGGCCGGCGC GGCGATGCGG CGGCTCGCCG AGTACCAGCC GCGCCGGGTC
GAGGTGGAGG GCCTGGAGTT CCGCGAGGGT CTGAACGCGG TCGGGATCAG CGGCGGCGTG
GCCGGCAACG TCATCCCGGA CGAGTGCTCG GTCCTGGTGA ACTTCCGCTT CGCCCCGGAC
CGCGGTCAGG ATGACGCGGA ACGTCATGTC CGGGAGGTCT TCGCGGATCT GGACGCTGAG
ATCGTGGTCA CAGACTCCGC TCCGGCGGCG CGTCCGGGGC TGCATCTGCC GTTGGCGGCG
GAGTTCGTCG GCGCGGTGAT GGAAGGCATG GACGCCGAGC CCACGGCGAA GTTCGGCTGG
ACCGATGTCG CGCGCTTCGC CGAACTCGGC GTTCCCGGCG TGAACTATGG TCCGGGCGAG
GGATCGCTGG CCCACAAACC GGATGAATCA GTGGACCTGG GGCAAGTTGT TCGATGCGCG
GAGCGGATGA GAAGCTGGCT CGGCTCCGCG CCGTGA
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| Protein sequence | MSGLDLTQSA ARLTAALVDI ESESGNEKAL ADAVEEALRK YPHLEVLRDG DSVLARTNLG
RAERVILAGH LDTVPIAVDS TGRRNVPSLL QGDWETGTLR GCGTSDMKAG VAVQLVLAAT
LAEPNRDVTY VFYECEEVEA ERNSLGRLIR TRPEWFAADF AVLLEPSNNI VEGGCQGTMR
ARLTFRGARA HSARSWLGDN AIHKAGAAMR RLAEYQPRRV EVEGLEFREG LNAVGISGGV
AGNVIPDECS VLVNFRFAPD RGQDDAERHV REVFADLDAE IVVTDSAPAA RPGLHLPLAA
EFVGAVMEGM DAEPTAKFGW TDVARFAELG VPGVNYGPGE GSLAHKPDES VDLGQVVRCA
ERMRSWLGSA P
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