Gene Caci_7940 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_7940 
Symbol 
ID8339318 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp9213943 
End bp9214482 
Gene Length540 bp 
Protein Length179 aa 
Translation table11 
GC content78% 
IMG OID644961025 
Producthypothetical protein 
Protein accessionYP_003118604 
Protein GI256397040 
COG category 
COG ID 
TIGRFAM ID[TIGR02949] anti-sigma factor, TIGR02949 family 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCAGGC ACCTCGGAGA CCGCCTCACC GCGCTGATCG ACGGCGAACT GGACCACGGC 
ACCCGCGAGC GGATGCTCGG CCATCTGGCG CAGTGCGGCG AGTGCCGCGC CGAGGCCGAC
GCCGAACGGC AGGTGAAGTC CCGGCTCGGC ACGATGTCCG CGCCGCAGGT CCCGGTGGAG
CTGATGCTCG GGCTGCTGAG TCTGGACGCC AACCGCCCGG CCGCCTCCGG CGCCGCCAAC
GGCCTGCCCA GCGGCGGTGG CGGAGCCTCG GCCGGCGGCC AGGGCTCGGG CCCGTCGCCG
TTCTCGTTCC AAACCGTGCC GATCCGCCCG CCGGCGGCTC CGGCGGCCGG CCGCCCCACG
GCCGGCCGCT CCCCGGTGCG CCCGCAGCGC CTGCGGGTCG CGGCGATCGG CGCGGTCTCG
CTGGCGGCCC TGGGCACCGG CGTGTGGCTG GTCGGCGACT TCAGCGCCAG CGCGACTCCG
GCGCACGGCC CGGCGAACCC GGCGCCGGCG CAGGTCGTCA CCTACGCACC GGGACACTGA
 
Protein sequence
MTRHLGDRLT ALIDGELDHG TRERMLGHLA QCGECRAEAD AERQVKSRLG TMSAPQVPVE 
LMLGLLSLDA NRPAASGAAN GLPSGGGGAS AGGQGSGPSP FSFQTVPIRP PAAPAAGRPT
AGRSPVRPQR LRVAAIGAVS LAALGTGVWL VGDFSASATP AHGPANPAPA QVVTYAPGH