Gene Caci_7939 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_7939 
Symbol 
ID8339317 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp9213306 
End bp9213737 
Gene Length432 bp 
Protein Length143 aa 
Translation table11 
GC content70% 
IMG OID644961024 
Productsec-independent translocase 
Protein accessionYP_003118603 
Protein GI256397039 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1826] Sec-independent protein secretion pathway components 
TIGRFAM ID[TIGR01411] twin arginine-targeting protein translocase, TatA/E family 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCGTTTC TCGACATCAG CCCGCTGGAG CTGATCGCGC TGCTGGCCCT GGCCGTCATG 
CTGTTCGGCC CGGACAAGCT GCCCGGCGCG GTACAGGGTC TGGCGCGTAC CCTGCGGCAG
TTCCGGGAGT TCACCCGCAA CGCCCAGAAC GACCTGAAGA AGGAGCTGGG TCCGGAGTTC
CAGGACATGG AACTGACCGA CCTGCACCCG AAGAACTTCG TGCGCAAGCA CGTGCTCGGA
CCCGACGGCG GCGACTTCCG CGAGATCAGG GACATCACCG ACTCGCTCAA CGGCGAGATA
CGCTCCGCGG CCGACGGCGC CCGACGCCCC CTGGCCGCCG ACGACGCGAC CCCGGACGAT
GCCCTCTACC GGGCTCCCGC CCCGCGCCTG GCCGCGGGCG AGCGCCCGCC GTTTGACGCG
GATGCGACGT GA
 
Protein sequence
MPFLDISPLE LIALLALAVM LFGPDKLPGA VQGLARTLRQ FREFTRNAQN DLKKELGPEF 
QDMELTDLHP KNFVRKHVLG PDGGDFREIR DITDSLNGEI RSAADGARRP LAADDATPDD
ALYRAPAPRL AAGERPPFDA DAT