Gene Caci_7937 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_7937 
Symbol 
ID8339315 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp9211093 
End bp9212352 
Gene Length1260 bp 
Protein Length419 aa 
Translation table11 
GC content73% 
IMG OID644961022 
ProductUBA/ThiF-type NAD/FAD binding protein 
Protein accessionYP_003118601 
Protein GI256397037 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGTCCGG TGCTGAAAGC GGGACTGCGG CGGTTGTGGC GGCCCGGCGG CTCACTGCAG 
GTGGGGGTGA CACCGGGCAG GTCGCTGCTG CTGAACGGAC TGAGTCCGAC CGCGACCGCG
TTCCTGGGCG CACTCGACGG ACACCGCGAC ATCGCAGGCT TGCTGACCCT GGCTGAAGAG
ATCGGACTAT CCGGCGCACA CGCCACGACA CTGCTCGACA TGCTCGCCCG AGCCGGATTC
CTCGACGACG CCGCCTACGA CCCGGGCCCG GCGCTGCGCG CGCTGGATGT CGCCGAAGCC
GACCGGCTGG CTCCCGACAT GGCGGCGCTG GCGCTCGGAT ACCTGGTTCC CGGCGGCGCG
GTGCGAGCGA TGACGCGGCG ACGGATGGCA GTGGTCGCCG TGTACGGATG CGGACGCGTC
GGAGCGTCGG TCGCGCACAT GCTGGCTTCG GCAGGGATCG GGTGCGTGGT GCCGATCGAC
AGCGGGCGGG CTCGGGCGGC CGATGCGGCA CCGGCGGGAT TCCGGAATCC ACGAGGACTG
AGCCACCGGG ACGAGCGGGA GGTTCCTGCT CCGCGGCGTG GGCGAGGACG CGGAAGTCGT
GCGGCGGATA GTGCGGCTGC CGACACGGTT AGCGCGACGA CGAACACCGC CGATCCCCAG
CCCGACGACG AATCCAACCT CGCCGCTCCC CCACCCCGCC GCCAAGACCT CGTCCGCACC
CTGATCCGCA CCTCGGCTCC CAGCACCCGC ACCACGATGC CGGCCAACCG CCAGCGCCCC
GACGTCGCTG TCCTCGCCCC GATCGCCGAC GGCTACCCGG CGCAGGCCGC CACCCTCCAG
TCCGACGGCG TGCCGCACGT CCCGGCCGAG GTGCACGAGA CCACCGGCGT GCTCGGACCG
TTCGTCCAGC CGGGCCGCAC CTCCTGCCTG CGCTGCCGCG ACCTGTACCG CACCGCGCGC
GACCCGGGGT GGCCGCGGGC GATGGTGCCG TTCGGCGGCG TGGACGCCGT ACCGGCGGCG
GAAGACCGGG CCTGCGACGT CACGATGGCG ACCCACCTGG CGGTCCAGAC GGCGCTGCAC
GTCCTGGCCT TCGTCGAGGG CGACCCGCCG CCGACGATGA ACGCCACGCT GGAACTGGCA
CCGCCCTTCG GCGCACAGAC CCGGCACGAG CGGCCGCCGC ACCCGGACTG CGGATGCCTG
GTCGACCTCA CCGAGGAAGC ACCCGCTGGT TCCTACCTGA GCTTCCGAGC AGGCCGCTGA
 
Protein sequence
MRPVLKAGLR RLWRPGGSLQ VGVTPGRSLL LNGLSPTATA FLGALDGHRD IAGLLTLAEE 
IGLSGAHATT LLDMLARAGF LDDAAYDPGP ALRALDVAEA DRLAPDMAAL ALGYLVPGGA
VRAMTRRRMA VVAVYGCGRV GASVAHMLAS AGIGCVVPID SGRARAADAA PAGFRNPRGL
SHRDEREVPA PRRGRGRGSR AADSAAADTV SATTNTADPQ PDDESNLAAP PPRRQDLVRT
LIRTSAPSTR TTMPANRQRP DVAVLAPIAD GYPAQAATLQ SDGVPHVPAE VHETTGVLGP
FVQPGRTSCL RCRDLYRTAR DPGWPRAMVP FGGVDAVPAA EDRACDVTMA THLAVQTALH
VLAFVEGDPP PTMNATLELA PPFGAQTRHE RPPHPDCGCL VDLTEEAPAG SYLSFRAGR