| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_7929 |
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| Symbol | |
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| ID | 8339307 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 9204470 |
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| End bp | 9205540 |
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| Gene Length | 1071 bp |
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| Protein Length | 356 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644961014 |
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| Product | PDZ/DHR/GLGF domain protein |
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| Protein accession | YP_003118593 |
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| Protein GI | 256397029 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3480] Predicted secreted protein containing a PDZ domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGCGCC GTGCCCTCAC CCTGAGTCTT GCCGGAACGA CGGTCGCCCT GCTCACGGCC
TCGGCGTTTC TGATCCCGAC GCCGTACGCG GAGATGTCGC CCGGCCCGAC CTACGACACG
TTGGGCAGCT ACTCGACCGA TTCCGGGCAG CCGGCCAAGC CGGTCATCGA CATCAACGGC
ACCCAGACCT TCCCGCACAC CAGCGGCGGG CAGCTGCGCA TGGTCACCGT CGAGGTGTCC
CGGGCGGACT ACAAGCCGAA CAGCGTCGAG GTGCTCTCCG GCTGGCTGTC CAGCGACAAG
ATCGTGGTCC CCCGCACGGT CATCTACCCC GAGGGGCAGA CCGCGGAGGA GGCGACCCAG
CAGAACACCG CGATGTTCGA CGACTCCGAG GACCAGGCGA TCACCGCGGC GCTGGCCGCC
AAGGGGATCA AGCCGCTGCG GACCGAGGTG ATCGTGGACT CGGTGACCGC GGGGAGCCCG
GCCGACGGCA AGCTGCAGGC GCAGGACGTC ATCGACGCGG TGGACGGCAC GAACCTGGTG
AAGCCCGACG ACGTCCACAC ACTGATCCAG AAGCACAAGC CGGGCGACAC GGTGGTCTTC
ACGGTGACCC GGGCCGGCAA GCAGCAGCAG GTCTCGGTGG TCACCACGCA GTCCCACGAC
ACCGGGCCGT CCCGGGCGCT GGTCGGCTTC CTGCCGGGCA CCCAGAACGT CTTCCCGTTC
GACGTGAAGA TCCAGCTCGA CAACGTCGGC GGGCCTAGCG CCGGCATGAT GTTCGCGCTC
GGGATCATCG ACGAGCTCTC GCAGCAGGAC CTCACCGGCG GCCTGAAGAT CGCCGGGACC
GGCACCATCG ACTCCTCCGG CAAGGTCGGG CCGATCGGCG GCGTGCAGAT GAAGACGCTG
GCCGCCAAGC GGGACGGCGC GACCGTCTTC CTGACGCCCG CCGACAACTG CGCGGACGCG
GTCAAGAACG CGCCGAGCGG GCTGCGTCTG GTGAAGGTCA ACACGCTGCA GGACGCGCTG
ACCGCGCTGA ACACGCTGCG GGCCGGCGGG AACCCTCAGA GCTGTAGCTG A
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| Protein sequence | MQRRALTLSL AGTTVALLTA SAFLIPTPYA EMSPGPTYDT LGSYSTDSGQ PAKPVIDING
TQTFPHTSGG QLRMVTVEVS RADYKPNSVE VLSGWLSSDK IVVPRTVIYP EGQTAEEATQ
QNTAMFDDSE DQAITAALAA KGIKPLRTEV IVDSVTAGSP ADGKLQAQDV IDAVDGTNLV
KPDDVHTLIQ KHKPGDTVVF TVTRAGKQQQ VSVVTTQSHD TGPSRALVGF LPGTQNVFPF
DVKIQLDNVG GPSAGMMFAL GIIDELSQQD LTGGLKIAGT GTIDSSGKVG PIGGVQMKTL
AAKRDGATVF LTPADNCADA VKNAPSGLRL VKVNTLQDAL TALNTLRAGG NPQSCS
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