Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_7919 |
Symbol | |
ID | 8339296 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 9191249 |
End bp | 9192052 |
Gene Length | 804 bp |
Protein Length | 267 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 644961003 |
Product | transcriptional regulator, DeoR family |
Protein accession | YP_003118583 |
Protein GI | 256397019 |
COG category | [G] Carbohydrate transport and metabolism [K] Transcription |
COG ID | [COG1349] Transcriptional regulators of sugar metabolism |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 50 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGGCAG CGCAGCGGCA GGCGTGGATC CTCCAAGAGG TCCGGCAGCA CGGCGCCGTG CGGGTCACCG AGCTGGTCGC GGCGCTGAAC GTGTCCGACA TGACGGTGCG CCGCGACCTG GACTCGCTGG CCGATCAGGG CCTGATCACC AAGGTGCACG GCGGCGCCAC GGCGCGCGGC GGCGGTTCCA CCGACGAGCC GGCGTTCAGC GTGAAGGCCG CGCGGCAGCG GCGTGCCAAG GAGGCGATCG CCCGGGCCGC CTCCGAGCTG GTCCGCCCCG GGACCGCGAT CGGGGTCTCG GCGGGGTCCA CGACCTATGC CTTCGCCCAA CAGCTGGCCC GGGTGCCGGA CCTGACCGTG GTGACGAACT CGCCCCCGGT CGCCGAGCTG CTCCACGCGC TGCCCGGGCC GCCGCAGACC GTCATCCTCA CCGGCGGTGT GCGCACGATC TCCGACGCGC TGGTCGGCCC GGTGGCGATC GACGCGATCC GCCGGCTGCA CCTGGACTGC GTGTTCATCG GGGTGCACGG GATCGACGCC GAAGCCGGGT TCACCAGCCC GAACCTGATG GAGGCCGAGA CCAACCGCAT GCTGGTCTCC ACCGCGCAGC GGCTGGTCGT GATGGCCGAC CACACGAAGT GGGGCGTCGT GGGGCTTTCG GAGATCGCCG CGCTGCACGA GGCCTCGGTG CTGGTGAGCG ACGACGGGCT GGGTTCCGGG GCGCGGCAGG TGCTGCGCGA GGCAGTGGGG GAGTTGATCG TCGTCCCCGT TGAAGGTGCG GGGGCGAATG AGGAGGAAGA GTAG
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Protein sequence | MLAAQRQAWI LQEVRQHGAV RVTELVAALN VSDMTVRRDL DSLADQGLIT KVHGGATARG GGSTDEPAFS VKAARQRRAK EAIARAASEL VRPGTAIGVS AGSTTYAFAQ QLARVPDLTV VTNSPPVAEL LHALPGPPQT VILTGGVRTI SDALVGPVAI DAIRRLHLDC VFIGVHGIDA EAGFTSPNLM EAETNRMLVS TAQRLVVMAD HTKWGVVGLS EIAALHEASV LVSDDGLGSG ARQVLREAVG ELIVVPVEGA GANEEEE
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