| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_7914 |
|---|
| Symbol | |
|---|
| ID | 8339291 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | - |
|---|
| Start bp | 9185574 |
|---|
| End bp | 9186296 |
|---|
| Gene Length | 723 bp |
|---|
| Protein Length | 240 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 644960998 |
|---|
| Product | 3-oxoacid CoA-transferase, A subunit |
|---|
| Protein accession | YP_003118578 |
|---|
| Protein GI | 256397014 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1788] Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit |
|---|
| TIGRFAM ID | [TIGR02429] 3-oxoacid CoA-transferase, A subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 47 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACAAGA CAGCTCCGAC CCCGGCTCAA GCCGTGGCCG ACATCCCCTC CGCTGCCACG
CTCGCCGTGG GCGGCTTCGG TCTCTGCGGC ATCCCCAGCA CCCTGATAGC GGCCCTGCTC
GAGCAGGGTG CGACCGGGCT CTCCGTCGTC TCCAACAACT GCGGTGTGGA CGACTGGGGC
TTGGGATTGC TGCTGAACGC CGGCCGCATC GCCAAGATGA CCAGCTCCTA CGTCGGCGAG
AACAAGGAGT TCGCGCGCCA ATATCTGGCC GGCGAACTCG AGGTCGAACT CCTCCCGCAG
GGCACGCTCG CCGAGAGCCT GCGCGCCGGC GGCCTGGGCA TCCCCGCGTA CTACACCCCG
GCCGGCGTCG GCACGAGCGT CGCCGAGGGC AAGGAGACGC GCGTCTTCGA CGGTCGCGAG
TACCTGCTGG AGCAGGCCAT CACCGCCGAC TTCGCGCTGG TCCGCGCCGC GAAGGGCGAC
CGGCACGGCA ACCTCCTCTT CCACGCCTCG GCCCGCAACT TCAACCCGGT GGCGGCGATG
GCCGGCCGGG TGACCGTCGC AGAGGTCGAA GAGCTGGTCG AGCCCGGCGA GTTGGACCCC
GACGAGATCC ATCTGCCCGG CGTCTTCGTC CAGCGGGTGG TCGTCGTCCC CCTGGACCAG
CGCGACAAGC GCATCGAAAA GCGGACCGTG ACCGCGGCCG GCACTGAGAA CGGAGCAATC
TGA
|
|---|
| Protein sequence | MDKTAPTPAQ AVADIPSAAT LAVGGFGLCG IPSTLIAALL EQGATGLSVV SNNCGVDDWG
LGLLLNAGRI AKMTSSYVGE NKEFARQYLA GELEVELLPQ GTLAESLRAG GLGIPAYYTP
AGVGTSVAEG KETRVFDGRE YLLEQAITAD FALVRAAKGD RHGNLLFHAS ARNFNPVAAM
AGRVTVAEVE ELVEPGELDP DEIHLPGVFV QRVVVVPLDQ RDKRIEKRTV TAAGTENGAI
|
|---|
| |