| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_7883 |
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| Symbol | |
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| ID | 8339259 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 9141865 |
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| End bp | 9143805 |
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| Gene Length | 1941 bp |
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| Protein Length | 646 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 644960966 |
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| Product | secretion protein snm4 |
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| Protein accession | YP_003118547 |
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| Protein GI | 256396983 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR02958] secretion protein snm4 |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0390406 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.0390775 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGCAG GTTCCGGGGT CGCCGGCCAC TGCCGGGTCA CCGTCGTCGC GCCCACCCGC
CGTGTCGATG TGGCGCTCCC CGAGGACGTG CCGCTCGCCG AACTCCTCCC GGAGCTCCTC
CGGCTGGTCG GCGATCCGCT CCCCACCCCG GCCGCCCTCG CGGCGGCCCT GACCGGCTAC
GTTCTCACCG GCGCGGACGG CGTCCCGCTG GACACCGCGG CCTCCCTGAC CGACCAGGGC
GTGCTCCACG GCGGCGTGCT CCGCCTGCGC CCGGCCGACG ACGTCCCCGA AGCCGCCGTC
CACGACGACA TCGCGGACGT CGTCGCCGAA GCGGTCATCG CCGGTGGTTC GCAGTGGACG
ACAGCCGCCT TGCGCGCGAC GGCTCTCGCG GTGGTTACCG TCGCCTCGAC ACTCGGCGCG
GTGGTGCTCT GGTTCTCCAA CACCGGGACG TTCCACGGCT GGAAGGGCAT CGTCGCAGGC
GTGATCACGC TGGTGCTGTT CGGGCTCGCG ATCCGCCAGG CGCGGTACGA CCAGTCCGCC
GTCGGCCGCG GCAGTTACTA CGGGTACGGA GACGGCGCGG GAGCAGGAGC TCCCTCCGGG
CCGCCCCAGG GAAGCCGACG GAACCGCGGA CACGATCGAG TGAATCAGCC CGACGCCGAC
AGCGCCTACG GCCGCGATCG ATCTCCCTAT GATCGTGAAT ACGGTGAGCC CACCGGCGAC
AATGGCTACT CCAGCCACGG CTACTCGTCC GACGATCCGG ATCCCAGCTT CGCCGACACC
ACCGTGAGCT TCGACCTCGC CTCCTTCGCG TCGGAGGCGC CGGACCCGCG CCGCACCGCC
GCTCGTTCTT TGAGCGGCAC CACTGCGACT GGCGTTCCAC CTCGTTCTCT CGGCGGCGCC
ACTGCCACCC GCGCTGCGCA CAGCGTCCGC GACGGTGGCC TCGGCAGCCT CGCAGCCTGG
CCCACCGTCG CCGAGGCGAT GGCGTGGGCG ACAGGCGCGC ACCACCAGCG TGACTACACC
GCGGCCGCCG TGCTCGCGGC GTCGTCGCTC CCTTATGCCT TCATCGCCGG CACCGGCCTG
CTGCCCACCG ACGCTTCCGC CGGACACGGC TTCGGCCGCG CCCACTTCCT CGCCGGCGCC
GTCACCGTCC TCGTCATGGC CATCGCCGCG ATCTTCGGCC TCGGCCGCCG GATCGCGGTG
CCGGTGGCAG GCGCGACCGT GGGCCTGGTC GCCACCTTCG CGGGCATCGG CTTGCTGCTG
ATTAAGGCCA GCCCGGCGGC CGGCATCGCC ATCGTCGCCG CAGTCTGCGC CCTGGCCATC
GAGGTCCTCC CGTTCGCCGC GATGGCCGTC GCTCGCTTCG TCATCGAACC TCCGACCAGC
GGCGTCGAAC CCGGCGACTT CGAAGGCTCC CCGGTCAACA ACTACGTCGT CGGCCTGCGC
GTCGCCCGCA CCCTCGACGT CCTGACCGGG CTGACAGCGG GCATCGGCAT GCTGCTCGTG
CTCTGCGTCG CCCTCCTCGT CATCCCGATC GGCGCCATGC AGACCGCGCC GGAAGACCAG
CACACGGTGT GGGAGCAGGC GCTCGCGATC CTCGTCTCCG GCGTGACCCT CTGCCGCGCC
CGCCTCTTCC GCGAACGCGC CCAGGTCCTC GCCGTCGCCG TCAGCGGCCT GATCGGCCTG
GTCATCGCCT TCAGTGCGAT GTCCGCCAAC GCCGTCCCCA ACCTCCGCGC GATGTGGCTG
GCGCCCCTCC TGGTCGTGAT CTCGCTGCTG GCCCTCGGTC TGGCCTCGAT CCGTCCCCGT
CGCGGCACCT CCGAGCCGAT CATGCCCCCG CGCTGGGCCC GCGCCGTCGA CATGGTCGAG
GGCGCGGTCT TCCTCGCCGT ACTGCCGGTG CTGATGGCTG TCCTCGGCGT GTACGGCCAG
GTGCGCAACC TGAAGGGCTG A
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| Protein sequence | MTAGSGVAGH CRVTVVAPTR RVDVALPEDV PLAELLPELL RLVGDPLPTP AALAAALTGY
VLTGADGVPL DTAASLTDQG VLHGGVLRLR PADDVPEAAV HDDIADVVAE AVIAGGSQWT
TAALRATALA VVTVASTLGA VVLWFSNTGT FHGWKGIVAG VITLVLFGLA IRQARYDQSA
VGRGSYYGYG DGAGAGAPSG PPQGSRRNRG HDRVNQPDAD SAYGRDRSPY DREYGEPTGD
NGYSSHGYSS DDPDPSFADT TVSFDLASFA SEAPDPRRTA ARSLSGTTAT GVPPRSLGGA
TATRAAHSVR DGGLGSLAAW PTVAEAMAWA TGAHHQRDYT AAAVLAASSL PYAFIAGTGL
LPTDASAGHG FGRAHFLAGA VTVLVMAIAA IFGLGRRIAV PVAGATVGLV ATFAGIGLLL
IKASPAAGIA IVAAVCALAI EVLPFAAMAV ARFVIEPPTS GVEPGDFEGS PVNNYVVGLR
VARTLDVLTG LTAGIGMLLV LCVALLVIPI GAMQTAPEDQ HTVWEQALAI LVSGVTLCRA
RLFRERAQVL AVAVSGLIGL VIAFSAMSAN AVPNLRAMWL APLLVVISLL ALGLASIRPR
RGTSEPIMPP RWARAVDMVE GAVFLAVLPV LMAVLGVYGQ VRNLKG
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