| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_7863 |
|---|
| Symbol | |
|---|
| ID | 8339239 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | + |
|---|
| Start bp | 9125307 |
|---|
| End bp | 9125735 |
|---|
| Gene Length | 429 bp |
|---|
| Protein Length | 142 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 644960946 |
|---|
| Product | Roadblock/LC7 family protein |
|---|
| Protein accession | YP_003118527 |
|---|
| Protein GI | 256396963 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2018] Uncharacterized distant relative of homeotic protein bithoraxoid |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 0.33246 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAACGACC CCAACCTGAC CCAAGCCGCC AGGAATCTCA ACTGGCTGAT CACCAACTTC
GTGGACCGCG TCCCGGGGGT CGCGCACACG GTGGTGGTCT CCTCCGACGG CCTGCTTCTG
GCGGTGTCCG ACGGATTCCC CCGCGACCGC GCCGACCAGC TGGCGGCCGT GGCCAGCGGC
CTGTCGTCGC TGACCCAGGG CGCCGCGCGC ATCTTCGAGG GCGGCGCGGT GACGCAGACC
GTCGTGGAGA TGGTCCGCGG CTTCCTGTTC GTGATGGCCA TCTCCGATGG CTCCGCCTTG
GCCGTACTCG CTTCCTCGGA TTGCGACATG GGCCTGATCG GCTATGAAAT GGCCCTGCTC
GTCGAACGCG CCGGCGACGT CCTGACGCCG GCGCTGCGCG CCGAGCTCCA GTCGTCGCTG
CCGCGCTGA
|
|---|
| Protein sequence | MNDPNLTQAA RNLNWLITNF VDRVPGVAHT VVVSSDGLLL AVSDGFPRDR ADQLAAVASG
LSSLTQGAAR IFEGGAVTQT VVEMVRGFLF VMAISDGSAL AVLASSDCDM GLIGYEMALL
VERAGDVLTP ALRAELQSSL PR
|
|---|
| |