Gene Caci_7838 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_7838 
Symbol 
ID8339214 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp9094157 
End bp9096997 
Gene Length2841 bp 
Protein Length946 aa 
Translation table11 
GC content69% 
IMG OID644960922 
Productpeptidase C60 sortase A and B 
Protein accessionYP_003118503 
Protein GI256396939 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.0706316 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGACC CCCCAGCCAT CGCCATCCCC ATAGGCACCC CAGCCACCGA CCAACAGCAC 
ACCCCCGCAA CGAGAGCACT GCCGGTAGCG AAGCATCCGA CGGCGAACGA TGGCGCGCAG
TCAGGCGAGA CCAACGGTCA CCTCGATCTC GCACGGGCCA GCGCGCACGG CATCCCGCCG
AGCCCTCAGC CGACATCCAC GAAAAGCCAG ACGCTCGATC CCAGCGCCGC GCTACCGTGC
CCCGATCCCC GTCGCGCAGT TCCGAATCTC AATCCGAGCG ATGCAGTTCC AAGTCCCGAT
CCCAGCGGGG CAGTGGCGAA TCTCGATCCC AGCGGCAGGC TGCCAGGTCT CGATCCCAGC
GCCACATTGG CGGTTCTCGA CCCCAGCGGC GGGCCGCCAA GTCCTGGTCC CAGCGCCGCA
TTACGGAGTC TCGATCCCAG CAGGGCATCG GCGAATCTCA ATCCCAGCGG CACGCTGCCA
AGTCCCGATC CCGGCGACGC TCTACCAAGT CTCGATACCA GCGGCGCCTT GCCGAGCGAT
GCGTCTTTGC CGCCCGATCC AGCCTCCGCA CATGGGCCGG TCTTTAGCCC GACCGGCAGG
CCGGCGACCT CCGAGCGGCC TCCCATCGCA GCACCCGATT CCCACATCGG GCACGATCGC
AACAGGGCCA GCACGCACAG CACCTCGCCA AGCCCGCAGC CGACATCTGC GGCCGACCAC
TCGCTCGATC CCAACGGGGC GCTGGCGAGC GATGCGTGTC CGCCCGCCAA TCCAGCCTCC
GCACGCGGTC CGGTCTTCGG CCTGATCGGC GAGCTGGCGA CCTCCGAGCG GCCTCCCATC
GCAACACCTG ATTCCCACAT CGAGCGTGAT CGCAACAGGG CCGACGCACA CGGCACCTCA
CCGAGCCCGC AGCCGACATC TGCGGCCGAC CACTCGCTCG ATCCCAACGG GGCGCTGGCG
AGCGATGCGT GTCCGCCCGC CAACCCGGCC TCCACACACG GCCCGAACTT CAGCCCGACC
CGCGAGCCGG CGGCCTCCAA TCGGCGTCCC GCCACAGCGC CCGGGTCTCA CATCGAGCGT
GATCGCAGCA GGGCCGACGC GCGCGGCACC TCGTCGAACC CGCAGCCGAC ATCTGCGGCC
GACCACTCGC TCGATCCCAG CGGCGCCCTG CCGAGCGATG CTTGTCCGCC TGCCGACCCA
GCCTCCACAC CCGGTCCAAT CTTCAGCCCG ATCGGCGAGC CAGCGAACTC CGAGCGGCCT
CCCGCCACAG CGCCCAGGTC TCACACCGAG CGTGATCGCA ACCGGATCGG CACAAGCGGC
ACCTCGCCGG GCCCTCAGTC GGCATCCGCG ACCAACCAGT TACTCGATCC CAACACGGCG
CTAGCGAGCG ATGCGTCTCT GCCCGCCAGT CCAGCCTCCG CACTGGGTCC GGTCAGCCCG
GTCGACGAGC TGGCGACCTC CGAGCGGCTT GCCATCGCAG CACCCGGGTC TCACATCGAG
CGTGATCGCA GCAGGGACGG CACGCGCGGC ATCTTGCCGA ACGCTCAGCC AGCGTCCGCG
ACCGACCAGT TGCTCGATCC CAACGGGGCG ATGCCGAGCG GTGCGTCTCC GCCTGCTGAC
CGAAACTCCG CGCACGGTCC GGTCTTCAGC CCGATCGGCG AGCCAGCAGC CTCCGAGCGG
CCTCCCGCCA CAGCGCCTCA GTCTCACGTC GAGCGTGATC GCAGCTGGGC CGACGCGCGT
GGCATCTTGC CGAGTGCTCA GTCGGCCGCG ACCAGCCGGT CGTTCGATCA CAGCGATCCA
GTGCCGCGCG ATGCGCCATT GCCGTCCGAT TTAGCCTCCG CATCTGGCCC GGAGTTCCAG
CTCAGCAGCG AGTTGGCGAC TTTTGGGCGG CGTCGCACTG CAGCGTTCGA TTCCCATGTT
GGGCTAGGTG AAAGCGGGGG CGGCGCGCGC GGGGTGTTGC CGAGCGGTCA GGCGGCGTCC
GTGGGCGGCC GGTTGCTCGA TGCGCGTGGC GCGTTGCCGA GTGATGCGGC TGGGGTCGTC
GACAGAGCCT CCGTGCTCGG TCCGGTGTTC AATTTGATCG GCGAGCGCGT GGCCTTTGAG
CGGCCTCGCG TCACGACTTC GGCCGATTCA CATGTCGAGG TGGGTGTTCG GGGGAAGGCT
CGTAGCGTCC CGAAGCCTGC GCCGAGTCCG GTCGTGCCGC AGAGTGAGGT GCGGCAGCCG
GGTCGGGTGC TGGCTTTCGC TTCGGTGGTG GCTGTTGTTG TCGGGTCGGG GTTTCTTGTA
CGGGCGCTGA TGCTCACTGA TCCGGTGCCG CCGCCGTTGC CGCCTGCATG GGCGGGGCGG
GTTGTGGGGG CGGTTGGGCA TCGGGCTGGG CCGCTGGGGT ATGCGCGGCC GGTGCGCGTC
AGCGTTGCTC GGGTTGGGAT TCATGCTGAT GTGCTTGCGC TTGGTTTGAC TCAGGAGGGC
GGTGTTGGGG TGCCGCCCGC CAAGGAGCCT TTGAAGGCCG CTTGGTATGA CCGGGGGCCG
GCGCCGGGGG AAGCTGGACC TGCGGTCATT ACGGGGCATG TTGATTCGCG GTTCGCGCCG
GGGAATCGTG CCGCGTTTTA TGAGTTGGGG GCGGTTCGGC CTGGCGATGC TGTCGATGTG
GTGCGCGCTG ACCATCGGGT CGCGGTGTTC CGTGTCGACT CGGTCGCGTT GGTGCCGAAG
GCCGGCTTTC CGACGCGGCA GGTCTACGGG CCGACGGGGT ACGCCGCGCT GCGGCTCATC
ACCTGCGGTG GCCACTACGA CCGGCGGACC GGGTACGCCG ACAACGTCAT CGTCTACGCG
CATCTCGTCG GGTCCCGCTG A
 
Protein sequence
MTDPPAIAIP IGTPATDQQH TPATRALPVA KHPTANDGAQ SGETNGHLDL ARASAHGIPP 
SPQPTSTKSQ TLDPSAALPC PDPRRAVPNL NPSDAVPSPD PSGAVANLDP SGRLPGLDPS
ATLAVLDPSG GPPSPGPSAA LRSLDPSRAS ANLNPSGTLP SPDPGDALPS LDTSGALPSD
ASLPPDPASA HGPVFSPTGR PATSERPPIA APDSHIGHDR NRASTHSTSP SPQPTSAADH
SLDPNGALAS DACPPANPAS ARGPVFGLIG ELATSERPPI ATPDSHIERD RNRADAHGTS
PSPQPTSAAD HSLDPNGALA SDACPPANPA STHGPNFSPT REPAASNRRP ATAPGSHIER
DRSRADARGT SSNPQPTSAA DHSLDPSGAL PSDACPPADP ASTPGPIFSP IGEPANSERP
PATAPRSHTE RDRNRIGTSG TSPGPQSASA TNQLLDPNTA LASDASLPAS PASALGPVSP
VDELATSERL AIAAPGSHIE RDRSRDGTRG ILPNAQPASA TDQLLDPNGA MPSGASPPAD
RNSAHGPVFS PIGEPAASER PPATAPQSHV ERDRSWADAR GILPSAQSAA TSRSFDHSDP
VPRDAPLPSD LASASGPEFQ LSSELATFGR RRTAAFDSHV GLGESGGGAR GVLPSGQAAS
VGGRLLDARG ALPSDAAGVV DRASVLGPVF NLIGERVAFE RPRVTTSADS HVEVGVRGKA
RSVPKPAPSP VVPQSEVRQP GRVLAFASVV AVVVGSGFLV RALMLTDPVP PPLPPAWAGR
VVGAVGHRAG PLGYARPVRV SVARVGIHAD VLALGLTQEG GVGVPPAKEP LKAAWYDRGP
APGEAGPAVI TGHVDSRFAP GNRAAFYELG AVRPGDAVDV VRADHRVAVF RVDSVALVPK
AGFPTRQVYG PTGYAALRLI TCGGHYDRRT GYADNVIVYA HLVGSR