| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_7828 |
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| Symbol | |
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| ID | 8339204 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 9081360 |
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| End bp | 9082811 |
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| Gene Length | 1452 bp |
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| Protein Length | 483 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 644960912 |
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| Product | transcriptional regulator, PucR family |
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| Protein accession | YP_003118493 |
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| Protein GI | 256396929 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG2508] Regulator of polyketide synthase expression |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCCGCCGA CGATCGCCTC CCTGCTCGCC GACCGACCTC TGGGCCTGCG TCTGCTCACC
GCCGAAGGGC CGGCCGGGGA CACCTCGCGC GAGGTGCGGT GGGTGCACAC CACCGAGCTG
AACGACCCGG CGCCGTTCCT GGAAGGCGGC GAACTGCTGC TGACCACCGG GCTGCGGCTG
GCCGACCCCG GGTTCGACCT CGAGGCCTTC CTGTCGGGAC TGGTACGCGC CGGGGTCGCC
GGGCTGGGGT TCGGCGTCGG GCTCAACAAC GCCGCGGTCC CGGATCGGTT CGTCGCCGCG
GCGTCGGCGC ACGGCCTGCC GGTCCTGGAG GTACCGAAAG CCACGCCGTT CATCGCGATC
GCGAAGTCGG TGTCGAAGGC GCTGGCGGTC GAGGAGTACC GCGCCCTCAC CGAGGGGTAT
CGGACGCAGC AGGAACTGGT GAAGTCGGCG CTGGCGCACG AGCCGCAGCG CTCCCTGGTC
CGCTCGCTGG TGCGCGGGCT CGGGCCCGGA GCGTGGGCGA TTCTGGCCGG CGCGGACGGC
GCGGTTCTGC ACAGCGCGGG ACCGGTACCC GGCCTGGACC TGGCGCCGGA GCTGGCCCGG
CTGCGCGGCG GGACGCTGCC CAGCAGCGCG TCGATCCTCA CCGAATCAGG GCACGTCGAG
GTGCACGCGC TCGGGGCGGG CAAGCGGGTC ATGGGCTTCC TGACCGTCGG GCTGCTGGAG
CGCACGAGCG GGCCGGACAC GACCGGCCGC CAGATCCTGG CCGTCGCGCT CACCCTGCTC
ACGCTCGGGG TCGAGCAGCC GACCAAGGAC GTGACGGTCG CCGAGCTGAC GCTGCGCCGC
GCAGTGGTGC GGCTGCTGCT GGCCGGATAC GTGGATGCGG CGTACGAAGC CGCGGGGGAG
CTGCGCGTGC CATTGCCGCC GGAACCGGTG CGGATCGCGC GCGACTCCGT GCGCGACGAG
GCGGTGTCGG ACCGCGTGTT CGTGCTCGAA GAGGACGGCG AGCGCGTGCT GGTCGCCCCG
GCCGACTTCG AGGGCTTCAC CGGCGGCGTC TCGGACGCGA TCGGCTATGC GGACTTCGGG
CGCGGCTACC GGCAGGCCGG CGAGGCGCTG GCGACCGCGC GCAAGAGCGG ACGGCCGACG
GTGTACTTCG CGGAGTCCGG CTCGGGACTG GAGTCGCTGT TCGCGGACCA GGGCGTCCGC
GACTTCGCAG CCGGGCTGCT GCGGCCGCTG GTCGAGGCGG ACCGCGCCGA ACTGGTGCCG
ACGCTGCGTG CCTGGCTGTC GCACAACGGT CAGTGGGACT CCGCGGCTGC GGAGCTGGGG
GTGCACCGGC ACACGGTGCG GGCTCGGATC GCGCGGGCCG GGGAGCTGTT GGACAAGGAT
CTGACCGCCA ACGACTCGGC GGATGCGCGG ATGGAGCTGT GGTTCGCGCT GCGGGTGCGC
GAGGGGCACT AG
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| Protein sequence | MPPTIASLLA DRPLGLRLLT AEGPAGDTSR EVRWVHTTEL NDPAPFLEGG ELLLTTGLRL
ADPGFDLEAF LSGLVRAGVA GLGFGVGLNN AAVPDRFVAA ASAHGLPVLE VPKATPFIAI
AKSVSKALAV EEYRALTEGY RTQQELVKSA LAHEPQRSLV RSLVRGLGPG AWAILAGADG
AVLHSAGPVP GLDLAPELAR LRGGTLPSSA SILTESGHVE VHALGAGKRV MGFLTVGLLE
RTSGPDTTGR QILAVALTLL TLGVEQPTKD VTVAELTLRR AVVRLLLAGY VDAAYEAAGE
LRVPLPPEPV RIARDSVRDE AVSDRVFVLE EDGERVLVAP ADFEGFTGGV SDAIGYADFG
RGYRQAGEAL ATARKSGRPT VYFAESGSGL ESLFADQGVR DFAAGLLRPL VEADRAELVP
TLRAWLSHNG QWDSAAAELG VHRHTVRARI ARAGELLDKD LTANDSADAR MELWFALRVR
EGH
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