Gene Caci_7772 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_7772 
Symbol 
ID8339148 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp9011696 
End bp9012730 
Gene Length1035 bp 
Protein Length344 aa 
Translation table11 
GC content70% 
IMG OID644960856 
Productputative integral membrane protein 
Protein accessionYP_003118437 
Protein GI256396873 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCGTG CCGCCCTCGA AGCCGCCAAC GCCGACCTCT CTGAGCGCGG GCGCAAGGGA 
CGCATCGGTT TCTTCGTCTT CATGGCGCTG CTCATGCAGC TGGCGTTCGC CGTCTCCTAC
ATCGGCGCCC TGCACGCTCC GCAGCGTCCG CATCGCATGC CGGTCGGCGT GGTGGCACCG
CTGCAGGTGG TGCGGCAGCT GCAGAAGACG TCGGACCAGG CCGGGCCGCT GTTCACGCTG
CAGCCGGTGG CGAGTCCTGA TGCCGCGGAG AGCGCGATCA AGCACCGCAC CGTGCTCGGC
GCCTACCTGC CGGCGGCGGT GGGCACCACC GATCAGTTGC TGGTGACGAC GGCCGTCGGC
CCGTCAGCGC CGCAAGCGCT GACCGTCGCC TTCGGCCAGG CCGCGCGGGC GCAGCAGCAC
ACGCTTCGGG TCAAGGACGT CCTGCCGCCC CACCGCGGCG ACGACGAGGG CCTGGTCCCG
TTCTACCTGG TGATCGCCTG GACCGTCGGC GGCTACCTGG CCTCGACCCT GGTCGGTCTG
ATGGGCGGTA TGAACAGCGC GACGCCGCGG CTGGCGCTGG AGCGCATCGG GATGCTCGCG
GTCTACAGCG TCCTCGGCGG GATCGGCGGG ACGCTGATCG TGCACACCAT CCTCGGGTTC
CTCGGCGGCG GCTGGTGGAC GCAGGCGCTG ATCGGGATGC TCGTCGTGTT CTCCGTGTCG
GTCTTCGCCA ACGGCCTTCA GACGTTCCTC GGGCTGATCG GGACCGGGGT TGTGATCGGG
CTGTTCGTGA TCCTGGGCAA CCCGTCCGCC GCCGGGCCGT GGCCGCGGAA CATGGTCCCG
GCGTTCTGGC GGGTGATCGG TCCGTGGCTG CCGAACTTCC AGGGCACCAA CGCCGTGCGC
GGCGTCGCCT ACTTCCACTC CCAAGGGCTG TCGACGGCGA TCTGGGTCTT CGTGATCTAC
GCCGCGATCG GGGTGATGCT GTCGGTCGCC GGGGCGGGGC GGGACAACGC GATTCTGCGG
ATGAGCGAGC ATTAG
 
Protein sequence
MNRAALEAAN ADLSERGRKG RIGFFVFMAL LMQLAFAVSY IGALHAPQRP HRMPVGVVAP 
LQVVRQLQKT SDQAGPLFTL QPVASPDAAE SAIKHRTVLG AYLPAAVGTT DQLLVTTAVG
PSAPQALTVA FGQAARAQQH TLRVKDVLPP HRGDDEGLVP FYLVIAWTVG GYLASTLVGL
MGGMNSATPR LALERIGMLA VYSVLGGIGG TLIVHTILGF LGGGWWTQAL IGMLVVFSVS
VFANGLQTFL GLIGTGVVIG LFVILGNPSA AGPWPRNMVP AFWRVIGPWL PNFQGTNAVR
GVAYFHSQGL STAIWVFVIY AAIGVMLSVA GAGRDNAILR MSEH