Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_7673 |
Symbol | |
ID | 8339049 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 8903070 |
End bp | 8905517 |
Gene Length | 2448 bp |
Protein Length | 815 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 644960757 |
Product | nucleic acid binding OB-fold tRNA/helicase-type |
Protein accession | YP_003118338 |
Protein GI | 256396774 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0531] Amino acid transporters |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.803412 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCAGTA CCAGCACGGC CGAGCCGAAA CGGGCTCGCT CGGGGGCCGC TGGGGTACCG GTCGCCACTC CCGGGGCGCT GGCGCCGGAC GTCAACCTCC CGGAGAGCCT GGGCTACCGG GTCAAGAAGC GCCTGCTCGG CACGCCGCTG GTGAACGACC AACTGCACGG CGAGAAGCTG TCGAACCCGA TCGCGCTGGG CGTGCTGGCG CCGGACTGCG TGTCCTCCTC GGCCTACGGC ACCGAGCAGA TGCTGACCCA GCTCGTGCCC TACTTCGGCA CCGTGGGCTT CATCCTGGTC ATGCCGGTCA CCGGGGTGAT CCTGGGCCTG CTGCTCCTGC TGACGCTGTG CTACCGCGAC GTCGTCCGGC ACTACACCAA GGCCGGCGGC GCCTACGTGG TGGCCCGCGA GAACTTCGGG CAGAAGGTCG CCCAGATCGC CGCGGTCGCC CTGCTCATCG ACTACATCGT GACGGTGGCG GTGCAGATCG CCGCCGGGAC CGACGCCATC GCGTCCTGGA TGACCTTCAC CTTCCACGTC AACATCGACA GCTGGAAGAT CTACCTGTCG GTCTTCGTGA TCATCCTGCT GTGCTTCGGC AACCTGCGCG GCATCCGCGA GGCCGGCCGG TCCTTCGCCG TCCCGGCCTA CTTCTACATC GGGATGGCCG GGCTGACCGT GGCGGTCGGG CTGGTCAAAC TGGCCACCGG CGGGCTGGCG GACTCCACGA GCATCCACGA CCAGGCCAAC GGCGCGCTCG GCCTGGGCAC CTACACCGGC ACGCTGTTCC AGGTCACGGC GGTCCTGTGG ATCCTGAAGG GCTTCGCGAA CGGCGGCTCC TCGCTGACCG GCCTGGAGGC CATCTCCAAC GGCGTGTCGG TGTTCAAGAA GCCGGCCGGC AGGAACGCCG CCAAGACGAT GGTCTGGATG TCGACCGCGC TGGGCTCGCT GGTCCTGGGC ATCTCGATCC TGGCCTGGCA GCTCCAGACC GACCCCTACA CCAGCGGCAA CCCGACCGTG CTGGCCCAGA TCACCAAGCT CACCTGGGGC GGGCACGGCT TCGGCACGGT GATGCTGACC CTGGTGCAGC TGGCCACGGC GCTGATCCTG TACACCGGCG GCAACACCTC CTTCAACGGC TTCCCGTTCC TGACCTCCTT CGTCGCCGAG GACAACTTCC TGCCCCGGCA GTTCCTGGTC CGCGGGCACC GGCTGGCGTT CTCCAACGGC ATCATCGTGC TCACGATCCT GTCGCTGGTG CTGCTCGTGG GCACCGGCGG CAACCTGACC TCGCTGGTCG CGCTGTACGC GATCGGGGTG TTCACCGGCT TCGTGATGGC CTCGGCGGGC CTGGTGAAGT ACCACTGGAC GCGCAACGAG CCGCACCGCT GGTGGAAGCT GTACGTGGCC GGCTCGGCGT GCGTGATGTC GTTCGCGGTC GTGGTGATCT TCGCGACCGT GAAGTTCACC GAGGGCGCGT GGATGGTCGT GATCGTCTTC CCGCCGGCGG TCTTCGGCCT GATCCAGCTG AACAAGCGCT ACCGGCGCGA GGCCGAGGCG CTGGCCAAGG CGCCGGCCTC GGCCGAGCTG CCGACCCGGA CCCAGACCTC GGTGATGGTC CTGGTCGACT CGGTCGACCT GGCGGTCATC AAGACGCTGC GCTACGCCCG CTCGCTGCGC CCGACCGAGG TCCGCGCCGT CCACCTGATG GTCGACAACC TCTACGCCGA GCAGCTGCGC AACCAGTGGG ACGCCTCGCA GGCCGCGGAC ATCCCGCTGG AGGTCATCGA GGTCCCCGAC CGCCGCATCC GCCGCGCGGC GATGGAGCTC GCGGCGCGCG AGACCGCCGA CGGCTACGAG GTGACCGTGC TGCTCCCGCG GCGCACGTAC TCCCCGGTCG TCGGGCGTCT GCTGCACGAC CGCACCGCCG ACCGCCTGGC CGAGGTGCTG TCGACGCTGC CGCACGTGGT GGCCACGATC GTGCCCTTCG ACGTGGTCGA GGCGATCGAG GAGCTGGAGC TGGCCTCGAA GGGCCGCAAG CCCCGGGCCA ACGCCGGCGA CGCGGCCGCT CCCACCGCGG CCAAGCCCCG CTCCACGAAG AAGATGCTGC TGGACGCCGA ATGCGCCAGC GTCCCGGACC CCGGCCACGG CGTGCCGGTC CCGGTCAGCG CGATCTCCAC GGTCCAGTGG CGCCAGCGCG CCGCGGTCGA GGGCCGCATC CGCTCGGTCG CGGTGTCCCC GGTGAAGGGC TCCCCCGCCC TGGAGGCCGA GCTGTACGAC GCCTCCGGCG GCATCACGCT GGTCTTCTAC GGCCGCCGCT CCATCCCCGG CATCGAGCCC GGCGCGATCA TGCGCGCCGA GGGCATGGTC GGCGAGATGG AGGGCCACCT GGCGATGGCG AACCCGACCT ACAAGCTGCT GCCGCGCGAG TACGGGGACG ACGAGTAG
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Protein sequence | MSSTSTAEPK RARSGAAGVP VATPGALAPD VNLPESLGYR VKKRLLGTPL VNDQLHGEKL SNPIALGVLA PDCVSSSAYG TEQMLTQLVP YFGTVGFILV MPVTGVILGL LLLLTLCYRD VVRHYTKAGG AYVVARENFG QKVAQIAAVA LLIDYIVTVA VQIAAGTDAI ASWMTFTFHV NIDSWKIYLS VFVIILLCFG NLRGIREAGR SFAVPAYFYI GMAGLTVAVG LVKLATGGLA DSTSIHDQAN GALGLGTYTG TLFQVTAVLW ILKGFANGGS SLTGLEAISN GVSVFKKPAG RNAAKTMVWM STALGSLVLG ISILAWQLQT DPYTSGNPTV LAQITKLTWG GHGFGTVMLT LVQLATALIL YTGGNTSFNG FPFLTSFVAE DNFLPRQFLV RGHRLAFSNG IIVLTILSLV LLVGTGGNLT SLVALYAIGV FTGFVMASAG LVKYHWTRNE PHRWWKLYVA GSACVMSFAV VVIFATVKFT EGAWMVVIVF PPAVFGLIQL NKRYRREAEA LAKAPASAEL PTRTQTSVMV LVDSVDLAVI KTLRYARSLR PTEVRAVHLM VDNLYAEQLR NQWDASQAAD IPLEVIEVPD RRIRRAAMEL AARETADGYE VTVLLPRRTY SPVVGRLLHD RTADRLAEVL STLPHVVATI VPFDVVEAIE ELELASKGRK PRANAGDAAA PTAAKPRSTK KMLLDAECAS VPDPGHGVPV PVSAISTVQW RQRAAVEGRI RSVAVSPVKG SPALEAELYD ASGGITLVFY GRRSIPGIEP GAIMRAEGMV GEMEGHLAMA NPTYKLLPRE YGDDE
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