Gene Caci_7657 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_7657 
Symbol 
ID8339033 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp8884098 
End bp8885402 
Gene Length1305 bp 
Protein Length434 aa 
Translation table11 
GC content75% 
IMG OID644960741 
Producthistidine kinase 
Protein accessionYP_003118322 
Protein GI256396758 
COG category[T] Signal transduction mechanisms 
COG ID[COG4585] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAATCCC CGGCCTGGCT CCCGCGTGCC CGCGACCTCG CGGTGATGTC GCTGGCGCTG 
CTGGAGGGCG TCGCGGACCT GTTCGAGGAC CGCCACGACC TGCCGATGGC GGTCCTGCAG
ATCTCGCTGG CCGCGGTCGG GACCGTGCTC CTGTGGTGGC GCCGGTCGCA CACCGAGCGC
ATCACCGTCC TGACCATGCC GCTGGCGATC CTCGGCCAGG TGCAGGTCCC GCTGGCGATG
ATGTTGTTCG CCCTGGCGGT GAAGCGCCGG GACCGGGTGA TGTGGCTGCT CACCGCGCTG
GCGGGCGCGG CGTTCCTGAG CCAGACCGCC ATCGAGAAGC ACGGCGACCT CACCTTCGGC
GACCTGCTGG TCACCGTGCT GTGGGTGCTG GTCCTGGTGC TGTTCGGGGC GTACTTCGGC
GCCCGGCACG ACCGGCTGGT CGCCCTGCAG GAGCGGGCCG AGCGCGCCGA GGCCGAGCAG
GAGGCGCGCG CCGAGGCCGC CCGGCTGGCC GAGCGGGCGC GCATCGCCCG GGAGATGCAC
GACGTGCTGG CCCACCGCAT CTCGCTGATC GCGCTGCACG CCGGCGGCCT GGAGATCACC
GAACGCCCCG ATCCCGGCGC CGCGCGGCAG ACCGCCGGGC TGATCCGGGA GACCGCGCGC
TCGGCGCTGG AGGACCTGCG CGACGTGCTC GGCGTGCTCG CCAGCGGCGA CACCTCGGCG
CCGCTCGCGC CGCAGCCGCG CTTCGCGGAC ATCGCCGAGC TGGTCGAGCG CTCGGCGGCG
GCCGGCGTCT CGGTGCGGCT GGTGCCGAAC AGCAGCCTGA GCCTGGAGGC CGCGGTGCCC
GAGGCCGTGG GCCGGGCCGC CTACCGGGTG GTCCAGGAGG CGCTGACCAA CATCCACAAG
CACGCCGCGT CGGCCGCCAC CACCGTCCGG CTGTCCGGGG CGCCGGACAT CGGGCTGGAG
GTGCGCGTGG AGAACCAGGC GCCGCGGGTG GTGGGCACCT CGCTGCCCGG CGCCGGCTCG
GGTCTGGCGG GCCTGCGAGA GCGGGTCGAG GTGGCCGGCG GGTCGTTCGA GGCCGGGCCG
ACCCTGCGCG GCGGCTTCCT GGTGCTGGCC TGGCTGCCGT GGCCGCACAC CAATGCCAAG
GACGAGACGG AGTACGGCGT GATCGTCTCC TCCCCCGGCT GCCGGCAGGA AGGCGGCGGC
TCGGCCGAAA CCCTCTGCGT GGCCGATGAT GGGCAGGACC GCGCGAGCGC GGCCGCCGGC
CCGTCCGACC GCCGCCTGAT CCCCTCCCCG GAGCCCGCCG CATGA
 
Protein sequence
MKSPAWLPRA RDLAVMSLAL LEGVADLFED RHDLPMAVLQ ISLAAVGTVL LWWRRSHTER 
ITVLTMPLAI LGQVQVPLAM MLFALAVKRR DRVMWLLTAL AGAAFLSQTA IEKHGDLTFG
DLLVTVLWVL VLVLFGAYFG ARHDRLVALQ ERAERAEAEQ EARAEAARLA ERARIAREMH
DVLAHRISLI ALHAGGLEIT ERPDPGAARQ TAGLIRETAR SALEDLRDVL GVLASGDTSA
PLAPQPRFAD IAELVERSAA AGVSVRLVPN SSLSLEAAVP EAVGRAAYRV VQEALTNIHK
HAASAATTVR LSGAPDIGLE VRVENQAPRV VGTSLPGAGS GLAGLRERVE VAGGSFEAGP
TLRGGFLVLA WLPWPHTNAK DETEYGVIVS SPGCRQEGGG SAETLCVADD GQDRASAAAG
PSDRRLIPSP EPAA