Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_7657 |
Symbol | |
ID | 8339033 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 8884098 |
End bp | 8885402 |
Gene Length | 1305 bp |
Protein Length | 434 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 644960741 |
Product | histidine kinase |
Protein accession | YP_003118322 |
Protein GI | 256396758 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG4585] Signal transduction histidine kinase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGAAATCCC CGGCCTGGCT CCCGCGTGCC CGCGACCTCG CGGTGATGTC GCTGGCGCTG CTGGAGGGCG TCGCGGACCT GTTCGAGGAC CGCCACGACC TGCCGATGGC GGTCCTGCAG ATCTCGCTGG CCGCGGTCGG GACCGTGCTC CTGTGGTGGC GCCGGTCGCA CACCGAGCGC ATCACCGTCC TGACCATGCC GCTGGCGATC CTCGGCCAGG TGCAGGTCCC GCTGGCGATG ATGTTGTTCG CCCTGGCGGT GAAGCGCCGG GACCGGGTGA TGTGGCTGCT CACCGCGCTG GCGGGCGCGG CGTTCCTGAG CCAGACCGCC ATCGAGAAGC ACGGCGACCT CACCTTCGGC GACCTGCTGG TCACCGTGCT GTGGGTGCTG GTCCTGGTGC TGTTCGGGGC GTACTTCGGC GCCCGGCACG ACCGGCTGGT CGCCCTGCAG GAGCGGGCCG AGCGCGCCGA GGCCGAGCAG GAGGCGCGCG CCGAGGCCGC CCGGCTGGCC GAGCGGGCGC GCATCGCCCG GGAGATGCAC GACGTGCTGG CCCACCGCAT CTCGCTGATC GCGCTGCACG CCGGCGGCCT GGAGATCACC GAACGCCCCG ATCCCGGCGC CGCGCGGCAG ACCGCCGGGC TGATCCGGGA GACCGCGCGC TCGGCGCTGG AGGACCTGCG CGACGTGCTC GGCGTGCTCG CCAGCGGCGA CACCTCGGCG CCGCTCGCGC CGCAGCCGCG CTTCGCGGAC ATCGCCGAGC TGGTCGAGCG CTCGGCGGCG GCCGGCGTCT CGGTGCGGCT GGTGCCGAAC AGCAGCCTGA GCCTGGAGGC CGCGGTGCCC GAGGCCGTGG GCCGGGCCGC CTACCGGGTG GTCCAGGAGG CGCTGACCAA CATCCACAAG CACGCCGCGT CGGCCGCCAC CACCGTCCGG CTGTCCGGGG CGCCGGACAT CGGGCTGGAG GTGCGCGTGG AGAACCAGGC GCCGCGGGTG GTGGGCACCT CGCTGCCCGG CGCCGGCTCG GGTCTGGCGG GCCTGCGAGA GCGGGTCGAG GTGGCCGGCG GGTCGTTCGA GGCCGGGCCG ACCCTGCGCG GCGGCTTCCT GGTGCTGGCC TGGCTGCCGT GGCCGCACAC CAATGCCAAG GACGAGACGG AGTACGGCGT GATCGTCTCC TCCCCCGGCT GCCGGCAGGA AGGCGGCGGC TCGGCCGAAA CCCTCTGCGT GGCCGATGAT GGGCAGGACC GCGCGAGCGC GGCCGCCGGC CCGTCCGACC GCCGCCTGAT CCCCTCCCCG GAGCCCGCCG CATGA
|
Protein sequence | MKSPAWLPRA RDLAVMSLAL LEGVADLFED RHDLPMAVLQ ISLAAVGTVL LWWRRSHTER ITVLTMPLAI LGQVQVPLAM MLFALAVKRR DRVMWLLTAL AGAAFLSQTA IEKHGDLTFG DLLVTVLWVL VLVLFGAYFG ARHDRLVALQ ERAERAEAEQ EARAEAARLA ERARIAREMH DVLAHRISLI ALHAGGLEIT ERPDPGAARQ TAGLIRETAR SALEDLRDVL GVLASGDTSA PLAPQPRFAD IAELVERSAA AGVSVRLVPN SSLSLEAAVP EAVGRAAYRV VQEALTNIHK HAASAATTVR LSGAPDIGLE VRVENQAPRV VGTSLPGAGS GLAGLRERVE VAGGSFEAGP TLRGGFLVLA WLPWPHTNAK DETEYGVIVS SPGCRQEGGG SAETLCVADD GQDRASAAAG PSDRRLIPSP EPAA
|
| |