Gene Caci_7648 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_7648 
Symbol 
ID8339024 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp8876489 
End bp8877655 
Gene Length1167 bp 
Protein Length388 aa 
Translation table11 
GC content73% 
IMG OID644960732 
Productglycosyl transferase group 1 
Protein accessionYP_003118313 
Protein GI256396749 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCATCC TGATGCTCGT CATCTCCAAC GTCGCGACCG ACACCCGCGT GATGCGCGAG 
GCCGCGGCGC TGGCCGGCGT CGGCCACGCG GTCCACGTCA TCGGCAAGGA CGTCTCGACC
GGGTACGAGC CGCCGGCCGG CGTCACGGTG GGCAGCGTCG GCGCCGGCTC GGCGTTCCGC
AAGCAGGGCG CCGAATCGCT CGGCGCGCGC CGCAAGCTGC CCCCGCACCT GCGCGCCGCG
CGCTGGCTGC TGCTGCCGCA GCACCGCAAC TCGGCCTTCG CCTCCTGGCG CGCCAAGGCC
AAGGAGCTGG CCGCCGGCCA GGAGTTCGAC ATCGTGCACG CGCACGACTT CAACACCCTG
GCGCTCGGTG TGGAACTGGC GCAGGACCAG CGCGTCCCGC TCGTCTACGA CACCCACGAG
CTGTGGCAGG GCCGGCCGCG CGTCGGCCGT CCGACGCCGC TGCAGAAACG CCGGGAAGCC
AAGCAGGAGC AGGCTTGGGG AGCCCGCGCC GCCACGGTGA TCACCGTCGG CGAGGGCGTG
GCCGAGGCGC TGCGCGAGGC GTACGGCTGG CGCCACGTCG AGGTCGTCCG CAACACCTTC
CCGCTGCCCG AGGGCGGTCC GGTCGACCCG CCGACGGCGG TCACCGGAGC GGTGTACGCC
GGCCGCATCG CGCCGTTCCG CGAGCTGGAG GCCATCGCCG GGGCGTCGGA GCTGGTGAAG
CCGCTGCGGA TCGTCATCGC CGGCCCGGCC GACGACACGT ATCTGGGTTC TTACAACGCC
AAGTCCGCCG AGGTCGTCGG CGCGCGCCCG GTGGACGAGG TGGACGCGCT CCTGCGCGAG
CTGGGCATCT CGCTGGTCAC GCACTCCGAC AAGTGGCTGA ACCACCGCCT GGCGATGCCG
AACAAGCTGT TCCACGCCGT GCGCGCCGGG GTCCCGGTCG TCGGCACGGA CGTGCAGGAA
CTGCGGCGCG TGGTGGAGGA GCACAAGCTG GGGGCGCTGT ACCAGCCCGG CGACGCCGCC
TCCCTCGCCG CCGCGCTGCA GGAGGTCGCG GACAACTACG CGACCTACGC GGTCAACGTG
CGCGCGGCCG CCCCGGCGCT GAGCTGGGAA GCCGATTCCG AAGTCCTGAG GGGGATCTAT
GAGCGCCTCG CCCCGAGAGG CGATTGA
 
Protein sequence
MRILMLVISN VATDTRVMRE AAALAGVGHA VHVIGKDVST GYEPPAGVTV GSVGAGSAFR 
KQGAESLGAR RKLPPHLRAA RWLLLPQHRN SAFASWRAKA KELAAGQEFD IVHAHDFNTL
ALGVELAQDQ RVPLVYDTHE LWQGRPRVGR PTPLQKRREA KQEQAWGARA ATVITVGEGV
AEALREAYGW RHVEVVRNTF PLPEGGPVDP PTAVTGAVYA GRIAPFRELE AIAGASELVK
PLRIVIAGPA DDTYLGSYNA KSAEVVGARP VDEVDALLRE LGISLVTHSD KWLNHRLAMP
NKLFHAVRAG VPVVGTDVQE LRRVVEEHKL GALYQPGDAA SLAAALQEVA DNYATYAVNV
RAAAPALSWE ADSEVLRGIY ERLAPRGD