Gene Caci_7642 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_7642 
Symbol 
ID8339018 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp8868584 
End bp8870134 
Gene Length1551 bp 
Protein Length516 aa 
Translation table11 
GC content71% 
IMG OID644960726 
Productglycosyl transferase group 1 
Protein accessionYP_003118307 
Protein GI256396743 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCACGT CCGACCAGCC CCGCAGTGTT CGGCGCCCCC GCGTTGTCAT GCTGGTCGGG 
AACTTCATCG ACGGCGACTC CCGGGTCCAG AAGGAGGCGC GCTCGGCGGC CGAGGCCGGC
TGGGACACCT ACCTGGTCGG ACGCTCGCGC AGCGGCAAGC GCGAGGAGTC GGCGTTCGGC
GAGGTGACCA TCCTGCGCCC GGCCGAGAGC ATGGCCGCCA CCAAGTACCG GACCTACCAT
CCGCGCCGCA GCGGTGTCAG CGGTCTGATC GCGTATTCCA CGATCGAACT GGGCAAGGTC
AAGCACCAGC GGCAGCGCAT CCGGCAGTCC AACCTGGCCG TCGAGCGCGA ACTGCTGGCC
CGCCGCTCCG CCGACGGTCT GAACCCGGCG TCCAAGCTGG TCGACGAGGC GGTGCTGGCC
GCCAAGTCCC TCGGCGTGAA GGCCGCCGGC TACTGGATCT CGGCGCGCAA GCAGGCGCTG
GACCACAACT ACAACATCGT CCAGGAATCG CCCAGCACCT CGCTGGAGCA GCTGATGGTG
CGCCGCGGCG GCGAGGGCGC GGTCTGGAAC GCCCAGCCGC GCCTGGTCGA CTTCGAGGAC
TCCTTCGGCC GCGCCGCCGA CGAGCTGGAG CCGGACCTGA TACACGCCAA CGACGCCGAG
ATGCTCGGCG TCGCGGTGCG CGCGGCGGCG CGGGCCCGGG CCAAGGGCCG CACCGTGAAG
GTCATATACG ACGCCCACGA GTTCTTCGCC GGCGACACCC GCGACAACCC GACCTGGGCT
CCGGCGATGG CCGCGCAGGA GAGCAAGTAC CTGCCGCTGG CCGACGCCGT GATGAGCCCG
ATCGAGGGCT ACGCCTCCTC CATGGTCGAG CTCCACGGCA TCGAGAAGTT CCCCGGCCGC
CGGCCGCCGG TCCTGGTGAA GAACATGCCG GCGCTGGCCG ACCTGGCCGC CTCCGGCGAC
GACGTCCCGG GCGTCCGCGG CGCCCTGGGC CTGGCCGACG ACGTCCCGCT GCTGGTCCAC
CCGGGCAGCG TGACGAAGGT CCGCGGCCTG CAGACGGTGG TCGAGGCCCT GCCCGACCTC
GAGGGCGTGC ACGCCGCGCT CCTGGTCGGC CGCCGCGACG GCTTCGTCGC CGAACTGGTG
GCGATGGCTG AGAAGCTCGG CGTCTCAGAC CGCTTCCACC TGCTGGACTA CGTGCCCAGC
GAGGAGCTGA CCGCCTACCT GCGCTCGGCG ACGATCGGCA TCGACACCCT GCTCCACATC
CCGCTGCACG AGCTCACCAT CACCACCAAG TTCTGGTCCT ACATCAGCGC CGGCCTGCCG
GTGGTCGCCA GCGACGTCAA GGCCACCTCG GAGCTGACCC GCGAGCTCGG CAACGGCGAG
GTCTACACCG CCGACGACGC GAAGGCGTTC GCCGAGGCGG TGCGCAAGGT GCTCGCCGAC
CCGGCGGCCT ACACGAAGGC TTACACCGAG GACACGCTGC GCCGGTACTC GTGGGAGGGA
CAGGCCGAGA CGATGCTCGA GCTGTACCGC GAAGTGACCG GCAAGCCGTA G
 
Protein sequence
MTTSDQPRSV RRPRVVMLVG NFIDGDSRVQ KEARSAAEAG WDTYLVGRSR SGKREESAFG 
EVTILRPAES MAATKYRTYH PRRSGVSGLI AYSTIELGKV KHQRQRIRQS NLAVERELLA
RRSADGLNPA SKLVDEAVLA AKSLGVKAAG YWISARKQAL DHNYNIVQES PSTSLEQLMV
RRGGEGAVWN AQPRLVDFED SFGRAADELE PDLIHANDAE MLGVAVRAAA RARAKGRTVK
VIYDAHEFFA GDTRDNPTWA PAMAAQESKY LPLADAVMSP IEGYASSMVE LHGIEKFPGR
RPPVLVKNMP ALADLAASGD DVPGVRGALG LADDVPLLVH PGSVTKVRGL QTVVEALPDL
EGVHAALLVG RRDGFVAELV AMAEKLGVSD RFHLLDYVPS EELTAYLRSA TIGIDTLLHI
PLHELTITTK FWSYISAGLP VVASDVKATS ELTRELGNGE VYTADDAKAF AEAVRKVLAD
PAAYTKAYTE DTLRRYSWEG QAETMLELYR EVTGKP