Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_7642 |
Symbol | |
ID | 8339018 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 8868584 |
End bp | 8870134 |
Gene Length | 1551 bp |
Protein Length | 516 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 644960726 |
Product | glycosyl transferase group 1 |
Protein accession | YP_003118307 |
Protein GI | 256396743 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0438] Glycosyltransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACCACGT CCGACCAGCC CCGCAGTGTT CGGCGCCCCC GCGTTGTCAT GCTGGTCGGG AACTTCATCG ACGGCGACTC CCGGGTCCAG AAGGAGGCGC GCTCGGCGGC CGAGGCCGGC TGGGACACCT ACCTGGTCGG ACGCTCGCGC AGCGGCAAGC GCGAGGAGTC GGCGTTCGGC GAGGTGACCA TCCTGCGCCC GGCCGAGAGC ATGGCCGCCA CCAAGTACCG GACCTACCAT CCGCGCCGCA GCGGTGTCAG CGGTCTGATC GCGTATTCCA CGATCGAACT GGGCAAGGTC AAGCACCAGC GGCAGCGCAT CCGGCAGTCC AACCTGGCCG TCGAGCGCGA ACTGCTGGCC CGCCGCTCCG CCGACGGTCT GAACCCGGCG TCCAAGCTGG TCGACGAGGC GGTGCTGGCC GCCAAGTCCC TCGGCGTGAA GGCCGCCGGC TACTGGATCT CGGCGCGCAA GCAGGCGCTG GACCACAACT ACAACATCGT CCAGGAATCG CCCAGCACCT CGCTGGAGCA GCTGATGGTG CGCCGCGGCG GCGAGGGCGC GGTCTGGAAC GCCCAGCCGC GCCTGGTCGA CTTCGAGGAC TCCTTCGGCC GCGCCGCCGA CGAGCTGGAG CCGGACCTGA TACACGCCAA CGACGCCGAG ATGCTCGGCG TCGCGGTGCG CGCGGCGGCG CGGGCCCGGG CCAAGGGCCG CACCGTGAAG GTCATATACG ACGCCCACGA GTTCTTCGCC GGCGACACCC GCGACAACCC GACCTGGGCT CCGGCGATGG CCGCGCAGGA GAGCAAGTAC CTGCCGCTGG CCGACGCCGT GATGAGCCCG ATCGAGGGCT ACGCCTCCTC CATGGTCGAG CTCCACGGCA TCGAGAAGTT CCCCGGCCGC CGGCCGCCGG TCCTGGTGAA GAACATGCCG GCGCTGGCCG ACCTGGCCGC CTCCGGCGAC GACGTCCCGG GCGTCCGCGG CGCCCTGGGC CTGGCCGACG ACGTCCCGCT GCTGGTCCAC CCGGGCAGCG TGACGAAGGT CCGCGGCCTG CAGACGGTGG TCGAGGCCCT GCCCGACCTC GAGGGCGTGC ACGCCGCGCT CCTGGTCGGC CGCCGCGACG GCTTCGTCGC CGAACTGGTG GCGATGGCTG AGAAGCTCGG CGTCTCAGAC CGCTTCCACC TGCTGGACTA CGTGCCCAGC GAGGAGCTGA CCGCCTACCT GCGCTCGGCG ACGATCGGCA TCGACACCCT GCTCCACATC CCGCTGCACG AGCTCACCAT CACCACCAAG TTCTGGTCCT ACATCAGCGC CGGCCTGCCG GTGGTCGCCA GCGACGTCAA GGCCACCTCG GAGCTGACCC GCGAGCTCGG CAACGGCGAG GTCTACACCG CCGACGACGC GAAGGCGTTC GCCGAGGCGG TGCGCAAGGT GCTCGCCGAC CCGGCGGCCT ACACGAAGGC TTACACCGAG GACACGCTGC GCCGGTACTC GTGGGAGGGA CAGGCCGAGA CGATGCTCGA GCTGTACCGC GAAGTGACCG GCAAGCCGTA G
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Protein sequence | MTTSDQPRSV RRPRVVMLVG NFIDGDSRVQ KEARSAAEAG WDTYLVGRSR SGKREESAFG EVTILRPAES MAATKYRTYH PRRSGVSGLI AYSTIELGKV KHQRQRIRQS NLAVERELLA RRSADGLNPA SKLVDEAVLA AKSLGVKAAG YWISARKQAL DHNYNIVQES PSTSLEQLMV RRGGEGAVWN AQPRLVDFED SFGRAADELE PDLIHANDAE MLGVAVRAAA RARAKGRTVK VIYDAHEFFA GDTRDNPTWA PAMAAQESKY LPLADAVMSP IEGYASSMVE LHGIEKFPGR RPPVLVKNMP ALADLAASGD DVPGVRGALG LADDVPLLVH PGSVTKVRGL QTVVEALPDL EGVHAALLVG RRDGFVAELV AMAEKLGVSD RFHLLDYVPS EELTAYLRSA TIGIDTLLHI PLHELTITTK FWSYISAGLP VVASDVKATS ELTRELGNGE VYTADDAKAF AEAVRKVLAD PAAYTKAYTE DTLRRYSWEG QAETMLELYR EVTGKP
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