| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_7635 |
|---|
| Symbol | |
|---|
| ID | 8339011 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | - |
|---|
| Start bp | 8860707 |
|---|
| End bp | 8862230 |
|---|
| Gene Length | 1524 bp |
|---|
| Protein Length | 507 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 644960719 |
|---|
| Product | glycosyl transferase group 1 |
|---|
| Protein accession | YP_003118300 |
|---|
| Protein GI | 256396736 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0438] Glycosyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.212629 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 0.696625 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACAAACG ACCGCCGCCC CAGTGCTCGG CGCCCACGCG TGGCGATGCT CGTCGCCAAC
GACGTGCGCC TGGACTCGCG GGTGCAGAAA GCCGCCTACA GCGCCGCGGA GGCCGGCTAC
GACGTCCTCC TGCTCGGGTA CGAACCGAAC CGCAAGGGGC GTCCCTCGGA CCCGGCCTAC
ATCGGCGCGG CGCAGGTCGT GCGCACCGGA CTGCACAACA AGTGGCAGAT CGCGCAGTGG
CCGCTGAAGG ACGGCGGGTC GCCGAGCCTG CGGCTGATGC CGTTCCGGGC GCTGTCGTTC
GCCTCGTCGC TGGACTACAA GGCGCGGCGC CGCATCGTGC AGCGGATCAA GGAGCCCGGC
ACCGGCGACG GCAGCATGAA GCACCGCGCC AAGGAGATGC TCTGGAAGGT CTACTTCCGG
GACGGCGACT GGCGGCGCAC GGCCCGCCAC CTGCTGTGGC TGGAGTCCAG CTGGTCGGCG
CTGATCGAGG AGTTCGAGCC GGACCTGATC CACGCGCACG ACATGCACAC CCCCGGCATC
GCCGTGCGGG TGGCCGAGAA GCTGGGCCGC AAGGGCAAGC GGCCGAAGGT GCTCTACGAC
GCCCACGAGT TCGTGGCCGG CGTCTCCATG CCGGAGCAAC GGCGGCTGGC CTACGTCGGC
CTGGAAGGCG AGTACGTCCG CAAGGCCGAC GCGGTGATCA CCGTCTCCCC GCTGCTCGCG
CAGTGGCTGC AGGAGCGCTA CCACCTCACC GAGACGCCCG AGGTCGTGGC GAACGCGCCG
ATGCTGCACG TGCCCGGCGA CGAACGTGAC GAGTCGGGCG ATACGGACTC TGCGGACACG
GCGAACTCTG CAGACACGGC GAACTCTGCA GACTCCAAGG AGGCGCCGAG CCTGCGCAAG
GCCTGCGGCC TGGCCGACGA CGTCCCGCTG CTGGTCTACT CCGGCGCGGT CTCGCCGATG
CGCGGCATCG CGACCATGGT CGCCGGCCTG CCGGAGCTGC CGGACGTGCA CGTCGCGGTG
GTCCGCGGCG CCGACACCGA GTTCACCCGC GCGCTGCGGA AGCAGGCGGA GGGCCTCGGC
GTGGACGACC GGCTGCACAT GGTCGGCTAC GTGGCGCCGC ACCTGGTCCC GCAGTACCTG
GCCTCCGCCG ACATCGGCGT GATCCCGATC CTGCACACCC CGAACCACGA GGTGGCGCTG
ATCACGAAGT ACTACGAGTA CATGCACGCC AAGCTGCCGA TCGTGGTCTC CGACGTCCAG
GCGATGGCGG ACTTCACCCG GGACCTGGGC AACGGCGAGG TCTTCACCGC CGAGGACGCC
CACGAGTACG CTCAGGCCGT CGCCAAGGTT CTCGCCGATC GGCCCGCCTA CGCGTCCCGC
TACACTGACG ACCTGCTGGC GGCCAACTCC TGGGAGGGCC AGGCCGAGGT ACTGGGCGGG
GTGTACGCAC GGCTGCTCGG CACCGAGCCG GAACCGCGGA CGGGGGTCCG AGCGTTCGGC
GAGACGAGCG AGCCGACCGC ATAG
|
|---|
| Protein sequence | MTNDRRPSAR RPRVAMLVAN DVRLDSRVQK AAYSAAEAGY DVLLLGYEPN RKGRPSDPAY
IGAAQVVRTG LHNKWQIAQW PLKDGGSPSL RLMPFRALSF ASSLDYKARR RIVQRIKEPG
TGDGSMKHRA KEMLWKVYFR DGDWRRTARH LLWLESSWSA LIEEFEPDLI HAHDMHTPGI
AVRVAEKLGR KGKRPKVLYD AHEFVAGVSM PEQRRLAYVG LEGEYVRKAD AVITVSPLLA
QWLQERYHLT ETPEVVANAP MLHVPGDERD ESGDTDSADT ANSADTANSA DSKEAPSLRK
ACGLADDVPL LVYSGAVSPM RGIATMVAGL PELPDVHVAV VRGADTEFTR ALRKQAEGLG
VDDRLHMVGY VAPHLVPQYL ASADIGVIPI LHTPNHEVAL ITKYYEYMHA KLPIVVSDVQ
AMADFTRDLG NGEVFTAEDA HEYAQAVAKV LADRPAYASR YTDDLLAANS WEGQAEVLGG
VYARLLGTEP EPRTGVRAFG ETSEPTA
|
|---|
| |