| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_7622 |
|---|
| Symbol | |
|---|
| ID | 8338998 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | - |
|---|
| Start bp | 8844729 |
|---|
| End bp | 8846060 |
|---|
| Gene Length | 1332 bp |
|---|
| Protein Length | 443 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 644960706 |
|---|
| Product | nucleotide sugar dehydrogenase |
|---|
| Protein accession | YP_003118287 |
|---|
| Protein GI | 256396723 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0677] UDP-N-acetyl-D-mannosaminuronate dehydrogenase |
|---|
| TIGRFAM ID | [TIGR03026] nucleotide sugar dehydrogenase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 44 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAAGATCA GCGTCATTGG AATGGGCAAG ATCGGCCTGC CGCTGGCCGT CCAGTTCGCC
TCTAAGGGGC ACCAGGTCTA CGGCGTGGAC GTGGTCCCGC GTGTCGTGGA GCAGATCAAC
GCCGGTGTGG AGCCCTTCCC CGGCGAGGCC GAGCTCGACG TGCGGCTGCC GCGGGCGGTC
ACCGCCGGCA ACCTCACCGC CACCCTGGAC GGGGTCGCCG CGGTCGCCGA CAGCGACGCG
GTCGTGGTCG TCGTGCCGGT CGTCGTGGAC GAGGACGCGG TGCCGGACTT CCGCGCCATG
GACGCCGCCA CCCAGACCAT CGCCGCCGGC CTGAAGGAAG CCGCCGCCAA CGGCCGCACG
GGCATCCTGC TGAGCTACGA GACCACCCTG CCGGTCCACA CCACCCGCGA GCGCTTCCTG
CCCGCGCTGG AGGCCGCCTC GGGTCTGAAC GCCGGCCGCG ACTTCCTGCT CTGCCACAGC
CCCGAGCGCG TCTACACCGG CCGGGTCTTC GCGGACCTGC GCAAGTACCC GAAGCTGGTC
GGCGGGATCG ACACGGATTC GGCGTCCGCC GCGGTCGCCT TCTACGAGGC GGTCCTGGAC
TTCGACGAGC GCCCCGACCT CAAGCGCGGC AACGGCGTGT GGGACCTGGG CTCGGCGGAG
GCCGCGGAGC TGGCCAAGCT CGCCGAGACC ACCTACCGGG ACGTCAACAT CGGCCTGGCC
AACCAGTTCG CGCGCTTCGC CGACCGGACC GGCATCGACA TCTTCCAGGT GATCGAGGCC
TCCAACAGCC AGCCGTTCAG CCACATCCAC CAGCCGGGAC CCGCGGTCGG CGGCCACTGC
ATCCCGGTCT ACCCGCGCTT CTACCTGTTC AACGACCCCG AGGCCTCGAT CGTGCGCGCG
GCCCGCGAGT CCAACCTCGC ACAGCCGGCG TACCTGGTCG GGCTGCTGGA GGGCCTGCTC
GGCGGCGCGA CCGGCGGCGG CGGTCTGGCC GGCCGGACGG TGCTGGTGCT CGGCGCGGCC
TACCGCGGCG GCGGCGTGAA GGAGACCGCG TTCTCCGGCG TCTTCGGCCT GGTCGCGGCG
CTGGCCGGGG AGGGCGCCCA GCCGGTCGTC TCCGACCCGC TGTACACCGC CGAGGAGCTG
GCCGCGCTCG GCCTGCCGGC CTACGAGCCC GGCACCGAGG TCGCGGGCAT CATCGTCCAC
ACCGAGCACG AGGAGTACCG CGAGCTGGCG GCGGCGGACT TCCCCGGCGT GAAGGTGATC
GTCGACGGCC GCAACATCAC CGACCCGGCC AAGTGGGACG GCGTCGCCCG CAAGGTGCTG
GGCATCGCCT GA
|
|---|
| Protein sequence | MKISVIGMGK IGLPLAVQFA SKGHQVYGVD VVPRVVEQIN AGVEPFPGEA ELDVRLPRAV
TAGNLTATLD GVAAVADSDA VVVVVPVVVD EDAVPDFRAM DAATQTIAAG LKEAAANGRT
GILLSYETTL PVHTTRERFL PALEAASGLN AGRDFLLCHS PERVYTGRVF ADLRKYPKLV
GGIDTDSASA AVAFYEAVLD FDERPDLKRG NGVWDLGSAE AAELAKLAET TYRDVNIGLA
NQFARFADRT GIDIFQVIEA SNSQPFSHIH QPGPAVGGHC IPVYPRFYLF NDPEASIVRA
ARESNLAQPA YLVGLLEGLL GGATGGGGLA GRTVLVLGAA YRGGGVKETA FSGVFGLVAA
LAGEGAQPVV SDPLYTAEEL AALGLPAYEP GTEVAGIIVH TEHEEYRELA AADFPGVKVI
VDGRNITDPA KWDGVARKVL GIA
|
|---|
| |