Gene Caci_7517 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_7517 
Symbol 
ID8338887 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp8709070 
End bp8709915 
Gene Length846 bp 
Protein Length281 aa 
Translation table11 
GC content71% 
IMG OID644960596 
Producttranscriptional regulator, IclR family 
Protein accessionYP_003118183 
Protein GI256396619 
COG category[K] Transcription 
COG ID[COG1414] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGACA TCGGCATAAC GAGCGGACCT GCGGTGGGAT CCGCCGCCAC GACCAAGGAC 
GGCGCGCTCG ACGGCACCGG TGGCGACTCC GCGGGAGTGA AGTCGGCGCG GCGGGCCGTG
GAGCTGTTGG AGGCCTTCGG CTCGAACCAC TCCTGGCTCT CGCTCACCGA TCTGCACCAC
CTCACCGGGT TCCCGCGCTC CTCGCTGCAC GGGCTGCTGC GCACGCTGCG CGACGTCGGC
TGGATCGAGT CCGACGACGC CGGCACCCGG TTCCGGCTCG GCGTCAAGGC TCTGATCTGC
GGGACCGCGT ACCTGGACCG CGATCCGGTG ATGCCGTACG CCACCGAGGC GCTGGAGAAG
ATCCGCGACC AGATCGGCTA CACCTGCCAC TTCGCGAGGC TCAACGGCCC GGACATCGTC
TACCTGCAGA CCCGCGAGTC GCGGACGTCG GCGCATCTTG TGTCCCGTGT CGGGCGGACG
CTGCCGGCGC ACGCCACGGC GCTGGGCAAG GTACTGCTGG CCGAACTGGC CGACGACGAG
CTGACCGGGG TGCTGCCCAA GCACCTGACG GCGCTGACCG ATCTGACCAT CACCGACCGC
GAGGCGCTCC GCTCGGAGCT GGCGTTCATC CGCGAGCGCG GGTACTCCAC CGAGCGCGGG
CAGAGCTCGC CGAACCTGGC GTGCGTCGCG GCGGTGGTGC CCTACCGGAT CCCGGGCACC
GACGCGATGA GCTGCTCGAT GCCCGGCGAG CGGGTCACGG ACGCGGAGTT GCAGCGGGTC
GGGGCGCTGC TGCGGGACGT CGCCGAGGAC CTCAGCCAGC AGCTGCGGCG CGCCGGGATT
CGTTGA
 
Protein sequence
MADIGITSGP AVGSAATTKD GALDGTGGDS AGVKSARRAV ELLEAFGSNH SWLSLTDLHH 
LTGFPRSSLH GLLRTLRDVG WIESDDAGTR FRLGVKALIC GTAYLDRDPV MPYATEALEK
IRDQIGYTCH FARLNGPDIV YLQTRESRTS AHLVSRVGRT LPAHATALGK VLLAELADDE
LTGVLPKHLT ALTDLTITDR EALRSELAFI RERGYSTERG QSSPNLACVA AVVPYRIPGT
DAMSCSMPGE RVTDAELQRV GALLRDVAED LSQQLRRAGI R