Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_7517 |
Symbol | |
ID | 8338887 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 8709070 |
End bp | 8709915 |
Gene Length | 846 bp |
Protein Length | 281 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 644960596 |
Product | transcriptional regulator, IclR family |
Protein accession | YP_003118183 |
Protein GI | 256396619 |
COG category | [K] Transcription |
COG ID | [COG1414] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCGACA TCGGCATAAC GAGCGGACCT GCGGTGGGAT CCGCCGCCAC GACCAAGGAC GGCGCGCTCG ACGGCACCGG TGGCGACTCC GCGGGAGTGA AGTCGGCGCG GCGGGCCGTG GAGCTGTTGG AGGCCTTCGG CTCGAACCAC TCCTGGCTCT CGCTCACCGA TCTGCACCAC CTCACCGGGT TCCCGCGCTC CTCGCTGCAC GGGCTGCTGC GCACGCTGCG CGACGTCGGC TGGATCGAGT CCGACGACGC CGGCACCCGG TTCCGGCTCG GCGTCAAGGC TCTGATCTGC GGGACCGCGT ACCTGGACCG CGATCCGGTG ATGCCGTACG CCACCGAGGC GCTGGAGAAG ATCCGCGACC AGATCGGCTA CACCTGCCAC TTCGCGAGGC TCAACGGCCC GGACATCGTC TACCTGCAGA CCCGCGAGTC GCGGACGTCG GCGCATCTTG TGTCCCGTGT CGGGCGGACG CTGCCGGCGC ACGCCACGGC GCTGGGCAAG GTACTGCTGG CCGAACTGGC CGACGACGAG CTGACCGGGG TGCTGCCCAA GCACCTGACG GCGCTGACCG ATCTGACCAT CACCGACCGC GAGGCGCTCC GCTCGGAGCT GGCGTTCATC CGCGAGCGCG GGTACTCCAC CGAGCGCGGG CAGAGCTCGC CGAACCTGGC GTGCGTCGCG GCGGTGGTGC CCTACCGGAT CCCGGGCACC GACGCGATGA GCTGCTCGAT GCCCGGCGAG CGGGTCACGG ACGCGGAGTT GCAGCGGGTC GGGGCGCTGC TGCGGGACGT CGCCGAGGAC CTCAGCCAGC AGCTGCGGCG CGCCGGGATT CGTTGA
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Protein sequence | MADIGITSGP AVGSAATTKD GALDGTGGDS AGVKSARRAV ELLEAFGSNH SWLSLTDLHH LTGFPRSSLH GLLRTLRDVG WIESDDAGTR FRLGVKALIC GTAYLDRDPV MPYATEALEK IRDQIGYTCH FARLNGPDIV YLQTRESRTS AHLVSRVGRT LPAHATALGK VLLAELADDE LTGVLPKHLT ALTDLTITDR EALRSELAFI RERGYSTERG QSSPNLACVA AVVPYRIPGT DAMSCSMPGE RVTDAELQRV GALLRDVAED LSQQLRRAGI R
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