| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_7507 |
|---|
| Symbol | |
|---|
| ID | 8338877 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | - |
|---|
| Start bp | 8700616 |
|---|
| End bp | 8701329 |
|---|
| Gene Length | 714 bp |
|---|
| Protein Length | 237 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 644960586 |
|---|
| Product | protein of unknown function DUF1275 |
|---|
| Protein accession | YP_003118173 |
|---|
| Protein GI | 256396609 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3619] Predicted membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 37 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCAGCGT CTGGTCTAAT CACCACCGTG AAAGCCGCTC TGCTGCGCCT GTCCGACCGC
CTCTACGACG ACGGAGCCGC CAAGCACGGC GTCCTGCCCG CGCCGCTGAT CGTCGCCACA
CTCGTCACCG GCGTCGTGGA CGCCGTCAGC TATCTGGCTC TGAACCACAT CTTCGTGGCC
AACATGACCG GCAACGTGGT CTTCCTCGGC TTCGCGCTCG CCGGTGCCAA GGGCCTGACG
GTCTGGGCGC CGTGCCTGGC CATCGCCTGC TTCGCCGCCG GCGCCTGGGC CGAGCCCCGG
CTGGCCCGCC GCACCGCCGG CGACGACCAG CACCGCCGGC TGGCGAACGC GGTCGCGGCG
CACGCCGTCT TCGTCGCCGT CGCGCTGCTG ATCGCCGCCG CGGAGGACGA CGGGAAGACG
TCCACGCACG CGCAGCTCAC CGCGATCCTA GCCTTCGGCT TCGGCGTCCA GAACGCGGTG
GTCCGCAAGC TCGCGGTCCC GGATCTGACC ACGACGGTCC TCACCATGAC CGTCACCGGG
ATCGCCTCCG ACCCGTTCGG CAAGCCGACC GTGCGCCGGC TGCTGTCGCT GGGCTGCATC
TTCGCCGGCG CGCTCTGCGG CGGGTTGCTG GTGCTGCACC AGAGCATCAG TGCGGCGCTC
GGGTTGGCGC TGGCGCTGTT GGTCGTGACC GCTGTGCTCG CGCGGGCGGA GTGA
|
|---|
| Protein sequence | MPASGLITTV KAALLRLSDR LYDDGAAKHG VLPAPLIVAT LVTGVVDAVS YLALNHIFVA
NMTGNVVFLG FALAGAKGLT VWAPCLAIAC FAAGAWAEPR LARRTAGDDQ HRRLANAVAA
HAVFVAVALL IAAAEDDGKT STHAQLTAIL AFGFGVQNAV VRKLAVPDLT TTVLTMTVTG
IASDPFGKPT VRRLLSLGCI FAGALCGGLL VLHQSISAAL GLALALLVVT AVLARAE
|
|---|
| |